RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 PDXDC2PQ6P474 469 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 USP17L6PQ6QN14 398 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 SARM1Q6SZW1 724 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 CCDC84Q86UT8 332 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-202ENST00000297979 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 TRIM5Q9C035 493 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 DISC1Q9NRI5 854 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 MYH7BA7E2Y1 1941 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
C9orf3-202ENST00000297979 PLA2G6O60733 806 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 TRAF1Q13077 416 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 AP3B2Q13367 1082 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
C9orf3-202ENST00000297979 CALCRLQ16602 461 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
C9orf3-202ENST00000297979 MCTP2Q6DN12 878 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 FAM160B2Q86V87 743 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 TRPM4Q8TD43 1214 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 MTMR9Q96QG7 549 aa16.12■□□□□ 0.17
C9orf3-202ENST00000297979 NAP1L4Q99733 375 aaKnown RBP16.12■□□□□ 0.17
C9orf3-202ENST00000297979 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 ESPNB1AK53 854 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 SLC37A4O43826 429 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 NBPF12Q5TAG4 269 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-202ENST00000297979 DCAF15Q66K64 600 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 FAM43AQ8N2R8 423 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 SMTNL1A8MU46 457 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 MEIS2O14770 477 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 IKBKBO14920 756 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
C9orf3-202ENST00000297979 STAT6P42226 847 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 ZNF75DP51815 510 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 MORC3Q14149 939 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
C9orf3-202ENST00000297979 BMP6P22004 513 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 TPM4P67936 248 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 DPYDQ12882 1025 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 DOCK1Q14185 1865 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 TECP42680 631 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 MLKLQ8NB16 471 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 RANBP17Q9H2T7 1088 aaKnown RBP16.1■□□□□ 0.17
C9orf3-202ENST00000297979 DDX25Q9UHL0 483 aaKnown RBP16.1■□□□□ 0.17
C9orf3-202ENST00000297979 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
C9orf3-202ENST00000297979 RRAGBQ5VZM2 374 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 CABP7Q86V35 215 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 TXKP42681 527 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
C9orf3-202ENST00000297979 NCAPHQ15003 741 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-202ENST00000297979 IGSF22Q8N9C0 903 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 GGA3Q9NZ52 723 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-202ENST00000297979 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-202ENST00000297979 USP11P51784 963 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 MYL5Q02045 173 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 LPAR1Q92633 364 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 KIAA1683Q9H0B3 1180 aa16.09■□□□□ 0.17
C9orf3-202ENST00000297979 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-202ENST00000297979 CASP1P29466 404 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 INPP5BP32019 993 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 EPS15P42566 896 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 CCDC174Q6PII3 467 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 STAMQ92783 540 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 MTRQ99707 1265 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 RAB34Q9BZG1 259 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 OPLAHO14841 1288 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
C9orf3-202ENST00000297979 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 PPP2R3BQ9Y5P8 575 aa16.08■□□□□ 0.16
C9orf3-202ENST00000297979 SPDYE3A6NKU9 549 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 GOLGA6L6A8MZA4 724 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 SYT17Q9BSW7 474 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 CUEDC2Q9H467 287 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 ZNF112Q9UJU3 913 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 CDC25BP30305 580 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 MOXD1Q6UVY6 613 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 SCYL3Q8IZE3 742 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 SPC24Q8NBT2 197 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 MRFAP1L1Q96HT8 127 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 P2RX7Q99572 595 aaKnown RBP16.07■□□□□ 0.16
C9orf3-202ENST00000297979 MAGEF1Q9HAY2 307 aa16.07■□□□□ 0.16
C9orf3-202ENST00000297979 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-202ENST00000297979 CLGNO14967 610 aa16.06■□□□□ 0.16
C9orf3-202ENST00000297979 HIRAP54198 1017 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-202ENST00000297979 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
C9orf3-202ENST00000297979 CRYGNQ8WXF5 182 aa16.06■□□□□ 0.16
C9orf3-202ENST00000297979 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
C9orf3-202ENST00000297979 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
C9orf3-202ENST00000297979 LRWD1Q9UFC0 647 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms