RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 CXorf56Q9H5V9 222 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
LRRTM1-201ENST00000295057 GSCP56915 257 aaPredicted RBP17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CUL4BQ13620 913 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CDKAL1Q5VV42 579 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CCDC148Q8NFR7 591 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 KAT2BQ92831 832 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 EHD4Q9H223 541 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 DDAH1O94760 285 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 GOLGA8HP0CJ92 632 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 GGCXP38435 758 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 BAG6P46379 1132 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 MMS19Q96T76 1030 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 HINFPQ9BQA5 517 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 ABHD10Q9NUJ1 306 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 GUCA1BQ9UMX6 200 aa17.11■□□□□ 0.33
LRRTM1-201ENST00000295057 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 SLX4Q8IY92 1834 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 PRPF3O43395 683 aaKnown RBP17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 LIG3P49916 1009 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 USP14P54578 494 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 DPYDQ12882 1025 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 AOC3Q16853 763 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 SLC35G1Q2M3R5 365 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 CEP89Q96ST8 783 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 EYA3Q99504 573 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 VIPAS39Q9H9C1 493 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 WNT7AO00755 349 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 MYBL2P10244 700 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 NFIAQ12857 509 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 CHP1Q99653 195 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 TMEM47Q9BQJ4 181 aa17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
LRRTM1-201ENST00000295057 ROBO3Q96MS0 1386 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 C21orf2O43822 256 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 CALM1P0DP23 149 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 CALM2P0DP24 149 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 CALM3P0DP25 149 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 CCT5P48643 541 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 CAPZA3Q96KX2 299 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 REXO2Q9Y3B8 237 aaKnown RBP17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 A0A087WUV0 522 aaPredicted RBP17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 AGPSO00116 658 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 FECHP22830 423 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 VPS16Q9H269 839 aa17.09■□□□□ 0.33
LRRTM1-201ENST00000295057 ECE2O60344 883 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 ATP1A1P05023 1023 aaKnown RBP17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 PLCG2P16885 1265 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 STIM1Q13586 685 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 STYK1Q6J9G0 422 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 APOBEC3HQ6NTF7 200 aaKnown RBP17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 CDC42EP5Q6NZY7 148 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 COG1Q8WTW3 980 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 STAMQ92783 540 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 DONSONQ9NYP3 566 aa17.08■□□□□ 0.33
LRRTM1-201ENST00000295057 NAV1Q8NEY1 1877 aa17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 SNED1Q8TER0 1413 aa17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 TUBBP07437 444 aa17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 EIF6P56537 245 aaKnown RBP17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 NPY5RQ15761 445 aa17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 FOXP1Q9H334 677 aaPredicted RBP17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 SRPRBQ9Y5M8 271 aaKnown RBP17.08■□□□□ 0.32
LRRTM1-201ENST00000295057 CDK5RAP2Q96SN8 1893 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 PPP1R3GB7ZBB8 358 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 PPP2R5BQ15173 497 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 KRT31Q15323 416 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 CEP95Q96GE4 821 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 TCP10Q12799 353 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 CYP26C1Q6V0L0 522 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 CCDC51Q96ER9 411 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
LRRTM1-201ENST00000295057 FAM196BA6NMK8 535 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms