RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
LPCAT1-201ENST00000283415 XDHP47989 1333 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 TRIM37O94972 964 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 BMP15O95972 392 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 SLURP2P0DP57 97 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 GNAQP50148 359 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 GSTO1P78417 241 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 LONRF2Q1L5Z9 754 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 ZFYVE27Q5T4F4 411 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 SNX29Q8TEQ0 813 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 FERMT2Q96AC1 680 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 LRWD1Q9UFC0 647 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 EFCAB8A8MWE9 144 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 B4DLN1 442 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 CERS3Q8IU89 383 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 WDR66Q8TBY9 1149 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 NAPGQ99747 312 aaPredicted RBP15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 RMND1Q9NWS8 449 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 ZEB2O60315 1214 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 NOVP48745 357 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 HLTFQ14527 1009 aaKnown RBP eCLIP15.36■□□□□ 0.051e-6■■■■■ 29.5
LPCAT1-201ENST00000283415 UBE2SQ16763 222 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 SLC35G1Q2M3R5 365 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 CEP112Q8N8E3 955 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 GBP3Q9H0R5 595 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
LPCAT1-201ENST00000283415 KRT79Q5XKE5 535 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 DBNDD1Q9H9R9 158 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 ODF2Q5BJF6 829 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 TYW1BQ6NUM6 668 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 CNGA4Q8IV77 575 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 GSDMAQ96QA5 445 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 TMCO5BA8MYB1 307 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 SRGAP2O75044 1071 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 PRPF4BQ13523 1007 aaKnown RBP15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 SPATA1Q5VX52 437 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 IFT81Q8WYA0 676 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 TMEM260Q9NX78 707 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 C10orf71Q711Q0 1435 aa15.35■□□□□ 0.05
LPCAT1-201ENST00000283415 TRAPPC10P48553 1259 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 UBXN2AP68543 259 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 SP4Q02446 784 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 USP40Q9NVE5 1235 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 HLA-DOAP06340 250 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 GNA11P29992 359 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 AMPD3Q01432 767 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 CYP4A11Q02928 519 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 PFKFB3Q16875 520 aaPredicted RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 HDXQ7Z353 690 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 GSPT2Q8IYD1 628 aaKnown RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 REXO1Q8N1G1 1221 aaKnown RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 GPR161Q8N6U8 529 aaKnown RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 SCAF8Q9UPN6 1271 aaKnown RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 FAN1Q9Y2M0 1017 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 SAMM50Q9Y512 469 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 MRFAP1Q9Y605 127 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 SRCAPQ6ZRS2 3230 aa15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 DCAF17Q5H9S7 520 aaPredicted RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 LIMA1Q9UHB6 759 aaKnown RBP15.34■□□□□ 0.05
LPCAT1-201ENST00000283415 NRXN2Q9P2S2 1712 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 CXCR5P32302 372 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 SPAG1Q07617 926 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 DAGLBQ8NCG7 672 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 TBCKQ8TEA7 893 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 SH3GLB2Q9NR46 395 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 SNED1Q8TER0 1413 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 DDX39AO00148 427 aaKnown RBP15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 RNF187Q5TA31 235 aaPredicted RBP15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 MRPL44Q9H9J2 332 aaKnown RBP15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 IL17RBQ9NRM6 502 aa15.33■□□□□ 0.04
LPCAT1-201ENST00000283415 COPB1P53618 953 aaKnown RBP15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 HERC4Q5GLZ8 1057 aaPredicted RBP15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 SV2BQ7L1I2 683 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 TSG101Q99816 390 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 ARFGEF1Q9Y6D6 1849 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 KIF5AQ12840 1032 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 KRT31Q15323 416 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 CALCRLQ16602 461 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 MICALL1Q8N3F8 863 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 IPO4Q8TEX9 1081 aaKnown RBP15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 SPAG5Q96R06 1193 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 POTEMA6NI47 508 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 PAFAH1B1P43034 410 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 C15orf52Q6ZUT6 534 aaKnown RBP15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 ATP8A2Q9NTI2 1148 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 HDAC6Q9UBN7 1215 aa15.32■□□□□ 0.04
LPCAT1-201ENST00000283415 A0A0U1RQJ8 604 aa15.31■□□□□ 0.04
LPCAT1-201ENST00000283415 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms