RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TRIM67Q6ZTA4 783 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 SLF1Q9BQI6 1058 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 NFKBIAP25963 317 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 FRA10AC1Q70Z53 315 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 CLCA2Q9UQC9 943 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 MAP7D3Q8IWC1 876 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 RETREG2Q8NC44 543 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 TMEM87BQ96K49 555 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 GDAP1L1Q96MZ0 367 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 SMCO2A6NFE2 343 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 ANO4Q32M45 955 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 LRRC8CQ8TDW0 803 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 PARP10Q53GL7 1025 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 ANO1Q5XXA6 986 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 TTC19Q6DKK2 380 aaPredicted RBP13.71□□□□□ -0.21
CDH11-201ENST00000268603 RPAINQ86UA6 219 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 CERS3Q8IU89 383 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 NUDCD1Q96RS6 583 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 TEX12Q9BXU0 123 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 KRT80Q6KB66 452 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 BTN2A2Q8WVV5 523 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 LZTS2Q9BRK4 669 aa13.71□□□□□ -0.21
CDH11-201ENST00000268603 IFIH1Q9BYX4 1025 aaKnown RBP13.71□□□□□ -0.21
CDH11-201ENST00000268603 BUB1O43683 1085 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 PDE8AO60658 829 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 GNA14O95837 355 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 CPP00450 1065 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 TIMM10P62072 90 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 FLOT2Q14254 428 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 REXO1Q8N1G1 1221 aaKnown RBP13.71□□□□□ -0.22
CDH11-201ENST00000268603 PAWRQ96IZ0 340 aaKnown RBP13.71□□□□□ -0.22
CDH11-201ENST00000268603 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.22
CDH11-201ENST00000268603 OAS2P29728 719 aaKnown RBP13.71□□□□□ -0.22
CDH11-201ENST00000268603 HADHAP40939 763 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 TFAP4Q01664 338 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 SPOPLQ6IQ16 392 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.22
CDH11-201ENST00000268603 PI4K2BQ8TCG2 481 aa13.71□□□□□ -0.22
CDH11-201ENST00000268603 ZNF233A6NK53 670 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 CLTAP09496 248 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 NCLNQ969V3 563 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 OTULINQ96BN8 352 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 INO80B-WBP1J3KQ70 363 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 ZNF263O14978 683 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 INO80BQ9C086 356 aaPredicted RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 H0YCG3 227 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 TECP42680 631 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 PANK4Q9NVE7 773 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 USP21Q9UK80 565 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 TLK1Q9UKI8 766 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 E9PMD0 336 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 FMNL1O95466 1100 aaPredicted RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 ARMC9Q7Z3E5 817 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 PDCD6IPQ8WUM4 868 aaKnown RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 PHKBQ93100 1093 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 ZNF594Q96JF6 807 aaPredicted RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 HIF1AQ16665 826 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
CDH11-201ENST00000268603 XAGE2Q96GT9 111 aa13.7□□□□□ -0.22
CDH11-201ENST00000268603 MYL3P08590 195 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 PPHLN1Q8NEY8 458 aaKnown RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 KCNJ14Q9UNX9 436 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 ARHGEF9O43307 516 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 PPARGP37231 505 aaPredicted RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 CCDC85BQ15834 202 aaPredicted RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 FAM178BQ8IXR5 827 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 DNAJC7Q99615 494 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 PSTPIP2Q9H939 334 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 TTC41PQ6P2S7 1318 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 N4BP1O75113 896 aaKnown RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 CCDC157Q569K6 752 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 SH3KBP1Q96B97 665 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 GNGT1P63211 74 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 FANCCQ00597 558 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 TRIML1Q8N9V2 468 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 SH3TC1Q8TE82 1336 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 CREB3O43889 395 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 ANP32DO95626 131 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 DYNLT1P63172 113 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 DCAF4L1Q3SXM0 396 aa13.69□□□□□ -0.22
CDH11-201ENST00000268603 RWDD4Q6NW29 188 aaKnown RBP13.69□□□□□ -0.22
CDH11-201ENST00000268603 DSTYKQ6XUX3 929 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms