RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 OR52Z1P0C646 297 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 TSPY3P0CV98 308 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 TSPY8P0CW00 308 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 ST5P78524 1137 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 FIGNQ5HY92 759 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 MIIPQ5JXC2 388 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 C16orf86Q6ZW13 317 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 KRT25Q7Z3Z0 450 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 CABP7Q86V35 215 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
BEST3-201ENST00000266661 RETREG2Q8NC44 543 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 NOA1Q8NC60 698 aaKnown RBP13.94□□□□□ -0.18
BEST3-201ENST00000266661 NEDD1Q8NHV4 660 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 TGFBRAP1Q8WUH2 860 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 P2RX5Q93086 422 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 ABCB6Q9NP58 842 aa13.94□□□□□ -0.18
BEST3-201ENST00000266661 CCDC66A2RUB6 948 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CTAGE15A4D2H0 777 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 BAG3O95817 575 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CTAGE8P0CG41 777 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 KCNA3P22001 575 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 VSNL1P62760 191 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CDK17Q00537 523 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 STK4Q13043 487 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 ORC2Q13416 577 aaPredicted RBP13.93□□□□□ -0.18
BEST3-201ENST00000266661 GRAPQ13588 217 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 ANKRD40Q6AI12 368 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 WDR93Q6P2C0 686 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CTAGE6Q86UF2 777 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CTAGE4Q8IX94 777 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 GRAPLQ8TC17 118 aaPredicted RBP13.93□□□□□ -0.18
BEST3-201ENST00000266661 TRIM47Q96LD4 638 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 PURBQ96QR8 312 aaKnown RBP13.93□□□□□ -0.18
BEST3-201ENST00000266661 TUBGCP2Q9BSJ2 902 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 PSD3Q9NYI0 1048 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CDK5RAP2Q96SN8 1893 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 TUBBP07437 444 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 LDHCP07864 332 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 CDK8P49336 464 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 STIM1Q13586 685 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 ERGIC2Q96RQ1 377 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 PLIN2Q99541 437 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
BEST3-201ENST00000266661 A0A1W2PQJ5 194 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 B4DLN1 442 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 EIF3CLB5ME19 914 aaKnown RBP13.92□□□□□ -0.18
BEST3-201ENST00000266661 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
BEST3-201ENST00000266661 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 HNRNPH3P31942 346 aaKnown RBP13.92□□□□□ -0.18
BEST3-201ENST00000266661 PPP1R2P41236 205 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 ZBED6P86452 979 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
BEST3-201ENST00000266661 HDXQ7Z353 690 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
BEST3-201ENST00000266661 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 EIF3CQ99613 913 aaKnown RBP13.92□□□□□ -0.18
BEST3-201ENST00000266661 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
BEST3-201ENST00000266661 RHBDL3P58872 404 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 CENPPQ6IPU0 288 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 NEK8Q86SG6 692 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 C2CD5Q86YS7 1000 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 CERS3Q8IU89 383 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 MAPKAPK5Q8IW41 473 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 KIAA0895Q8NCT3 520 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 SEMA6BQ9H3T3 888 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 BLOC1S4Q9NUP1 217 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 GUCA1BQ9UMX6 200 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 CD2APQ9Y5K6 639 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 MYH1P12882 1939 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 BICDL2A1A5D9 508 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 SMCO2A6NFE2 343 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 ERICH4A6NGS2 130 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
BEST3-201ENST00000266661 FCER1AP12319 257 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 KLK7P49862 253 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 USP14P54578 494 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 HNRNPH2P55795 449 aaKnown RBP13.91□□□□□ -0.18
BEST3-201ENST00000266661 KRT83P78385 493 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 PDE4DQ08499 809 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 GRB10Q13322 594 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 ZNF622Q969S3 477 aaKnown RBP eCLIP13.91□□□□□ -0.18
BEST3-201ENST00000266661 EXOC4Q96A65 974 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 CNOT6LQ96LI5 555 aaKnown RBP13.91□□□□□ -0.18
BEST3-201ENST00000266661 EYA3Q99504 573 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 LACRTQ9GZZ8 138 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
BEST3-201ENST00000266661 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
BEST3-201ENST00000266661 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
BEST3-201ENST00000266661 SAP30BPQ9UHR5 308 aaKnown RBP13.91□□□□□ -0.18
BEST3-201ENST00000266661 STX8Q9UNK0 236 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms