RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ECE1P42892 770 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 POLR2FP61218 127 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 CCHCR1Q8TD31 782 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 CCDC87Q9NVE4 849 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 MYH6P13533 1939 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 SYMPKQ92797 1274 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 SPATS2LQ9NUQ6 558 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 MYL1P05976 194 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 BFSP1Q12934 665 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 LARGE2Q8N3Y3 721 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 NLRP7Q8WX94 980 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 MMS19Q96T76 1030 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 MRPL46Q9H2W6 279 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 PLEKHA4Q9H4M7 779 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 JRKLQ9Y4A0 524 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 SAMD9Q5K651 1589 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 SART1O43290 800 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 HSPD1P10809 573 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 ADAM9Q13443 819 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 GPT2Q8TD30 523 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 SPDL1Q96EA4 605 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 INTS9Q9NV88 658 aaKnown RBP19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 ABCC12Q96J65 1359 aa19.03■□□□□ 0.64
NOTCH3-201ENST00000263388 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 CFAP61Q8NHU2 1237 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 USP28Q96RU2 1077 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 PTPRTO14522 1441 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 TESPA1A2RU30 521 aaPredicted RBP19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 TTC4O95801 387 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 TRAPPC10P48553 1259 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 EFCAB13Q8IY85 973 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 PTPN22Q9Y2R2 807 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 POLR2MP0CAP2 368 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 MX2P20592 715 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 NSFP46459 744 aaKnown RBP19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 FAM47AQ5JRC9 791 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 KAZNQ674X7 775 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 TMOD1P28289 359 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 POLGP54098 1239 aaPredicted RBP19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 PPM1KQ8N3J5 372 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 NRBF2Q96F24 287 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 GSDMAQ96QA5 445 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 HESX1Q9UBX0 185 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 SRGAP2BP0DMP2 458 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 SCYL2Q6P3W7 929 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 CNOT6LQ96LI5 555 aaKnown RBP19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 TPCN1Q9ULQ1 816 aa19.02■□□□□ 0.64
NOTCH3-201ENST00000263388 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 KLRF2D3W0D1 207 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 PPP6R2O75170 966 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 VPS41P49754 854 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 JADE1Q6IE81 842 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 NIM1KQ8IY84 436 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 CNOT10Q9H9A5 744 aaKnown RBP19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 ANAPC5Q9UJX4 755 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 SGK1O00141 431 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 PTK2Q05397 1052 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 ZBTB38Q8NAP3 1195 aaPredicted RBP19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 TUBGCP2Q9BSJ2 902 aa19.02■□□□□ 0.63
NOTCH3-201ENST00000263388 A0A0D9SFI3 127 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 EPHB4P54760 987 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 PCDHA7Q9UN72 937 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ZNF148Q9UQR1 794 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 CDC23Q9UJX2 597 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 MTMR6Q9Y217 621 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 HSPA8P11142 646 aaKnown RBP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 TTBK2Q6IQ55 1244 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 MAP7D3Q8IWC1 876 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 DHTKD1Q96HY7 919 aaPredicted RBP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 UIMC1Q96RL1 719 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 A0A1W2PQ27 194 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 A0A1W2PQ64 194 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 A0A1W2PQD8 194 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ECM2O94769 699 aaPredicted RBP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 MYL7Q01449 175 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 SMCR8Q8TEV9 937 aaPredicted RBP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 H2AFZP0C0S5 128 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 COPB1P53618 953 aaKnown RBP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 H2AFVQ71UI9 128 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 TEKT3Q9BXF9 490 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 PALM3A6NDB9 673 aaPredicted RBP19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ESRRGP62508 458 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ANKRD20A4Q4UJ75 823 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ANKRD20A8PQ5CZ79 823 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ANKRD20A2Q5SQ80 823 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 ANKRD20A1Q5TYW2 823 aa19.01■□□□□ 0.63
NOTCH3-201ENST00000263388 USP17L12C9JPN9 530 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 USP17L21D6R901 530 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 IFT122Q9HBG6 1241 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 FRMPD2Q68DX3 1309 aaPredicted RBP19■□□□□ 0.63
NOTCH3-201ENST00000263388 RASSF7Q02833 373 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 RPAINQ86UA6 219 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 FGAP02671 866 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 EHHADHQ08426 723 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 ARMCX5Q6P1M9 558 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms