RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PYM1Q9BRP8 204 aaKnown RBP19.99■□□□□ 0.79
SSB-201ENST00000260956 CCDC194A0A1B0GVG4 234 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 USP27XA6NNY8 438 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 PPP1R3GB7ZBB8 358 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 TMEM232C9JQI7 657 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 hCG_1984214I3L0E3 225 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 NYAP1Q6ZVC0 841 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 ZNF713Q8N859 430 aaPredicted RBP19.99■□□□□ 0.79
SSB-201ENST00000260956 ZKSCAN4Q969J2 545 aaPredicted RBP19.99■□□□□ 0.79
SSB-201ENST00000260956 HHIPL1Q96JK4 782 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 CAPNS2Q96L46 248 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 PIGSQ96S52 555 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 NFE2L3Q9Y4A8 694 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 PHF20L1A8MW92 1017 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 CBFA2T2O43439 604 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 EDIL3O43854 480 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 INPP5BP32019 993 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 AFMP43652 599 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 TBX2Q13207 712 aaPredicted RBP19.98■□□□□ 0.79
SSB-201ENST00000260956 RRP1BQ14684 758 aaKnown RBP19.98■□□□□ 0.79
SSB-201ENST00000260956 RGMBQ6NW40 437 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 ARMC9Q7Z3E5 817 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 KRT25Q7Z3Z0 450 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 TRMT44Q8IYL2 757 aaKnown RBP19.98■□□□□ 0.79
SSB-201ENST00000260956 IQUBQ8NA54 791 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 LRRC15Q8TF66 581 aa19.98■□□□□ 0.79
SSB-201ENST00000260956 RRP36Q96EU6 259 aaKnown RBP19.98■□□□□ 0.79
SSB-201ENST00000260956 COL2A1P02458 1487 aaPredicted RBP19.97■□□□□ 0.79
SSB-201ENST00000260956 LAD1O00515 517 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 GTPBP6O43824 516 aaPredicted RBP19.97■□□□□ 0.79
SSB-201ENST00000260956 AOC2O75106 756 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 ZNF157P51786 506 aaPredicted RBP19.97■□□□□ 0.79
SSB-201ENST00000260956 NAPAP54920 295 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 UBASH3AP57075 661 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 ZNF543Q08ER8 600 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 MTMR8Q96EF0 704 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 CCSER1Q9C0I3 900 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 MTMR7Q9Y216 660 aa19.97■□□□□ 0.79
SSB-201ENST00000260956 VGLL4Q14135 290 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 DHX8Q14562 1220 aaKnown RBP19.96■□□□□ 0.79
SSB-201ENST00000260956 PAXIP1Q6ZW49 1069 aaPredicted RBP19.96■□□□□ 0.79
SSB-201ENST00000260956 LRRC47Q8N1G4 583 aaKnown RBP19.96■□□□□ 0.79
SSB-201ENST00000260956 CCDC12Q8WUD4 166 aaPredicted RBP19.96■□□□□ 0.79
SSB-201ENST00000260956 WRNIP1Q96S55 665 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 TMX1Q9H3N1 280 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 ZNF112Q9UJU3 913 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 TTLL1O95922 423 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 ORC2Q13416 577 aaPredicted RBP19.96■□□□□ 0.79
SSB-201ENST00000260956 RASAL3Q86YV0 1011 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 CCAR2Q8N163 923 aaKnown RBP19.96■□□□□ 0.79
SSB-201ENST00000260956 CCDC34Q96HJ3 373 aa19.96■□□□□ 0.79
SSB-201ENST00000260956 SMCO2A6NFE2 343 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 DYNC1I1O14576 645 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 GJA5P36382 358 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 IREB2P48200 963 aaKnown RBP19.95■□□□□ 0.78
SSB-201ENST00000260956 SHROOM1Q2M3G4 852 aaPredicted RBP19.95■□□□□ 0.78
SSB-201ENST00000260956 E4F1Q66K89 784 aaPredicted RBP19.95■□□□□ 0.78
SSB-201ENST00000260956 TMEM139Q8IV31 216 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 UBA5Q9GZZ9 404 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 DISC1Q9NRI5 854 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.95■□□□□ 0.78
SSB-201ENST00000260956 PI4KBQ9UBF8 816 aa19.95■□□□□ 0.78
SSB-201ENST00000260956 FRMPD2Q68DX3 1309 aaPredicted RBP19.94■□□□□ 0.78
SSB-201ENST00000260956 PPP1R11O60927 126 aaPredicted RBP19.94■□□□□ 0.78
SSB-201ENST00000260956 JAG1P78504 1218 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 MAP3K9P80192 1104 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 MKRN3Q13064 507 aaKnown RBP19.94■□□□□ 0.78
SSB-201ENST00000260956 NONOQ15233 471 aaKnown RBP eCLIP19.94■□□□□ 0.78
SSB-201ENST00000260956 DNTTIP2Q5QJE6 756 aaKnown RBP19.94■□□□□ 0.78
SSB-201ENST00000260956 SPATA1Q5VX52 437 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 ZNF341Q9BYN7 854 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 DHX36Q9H2U1 1008 aaKnown RBP19.94■□□□□ 0.78
SSB-201ENST00000260956 C6orf50Q9HD87 102 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 SAMSN1Q9NSI8 373 aaKnown RBP19.94■□□□□ 0.78
SSB-201ENST00000260956 SNCAIPQ9Y6H5 919 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 OTOFQ9HC10 1997 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 SYNRGQ9UMZ2 1314 aa19.94■□□□□ 0.78
SSB-201ENST00000260956 A0A1B0GTH6 734 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 PP2D1A8MPX8 630 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 SLC10A3P09131 477 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 GNA11P29992 359 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 KARSQ15046 597 aaKnown RBP19.93■□□□□ 0.78
SSB-201ENST00000260956 DCAF15Q66K64 600 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 PPP1R18Q6NYC8 613 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 HOMER1Q86YM7 354 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 ANKRD13AQ8IZ07 590 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 ELP3Q9H9T3 547 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 JMJD4Q9H9V9 463 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 TBC1D12O60347 775 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 SERPINC1P01008 464 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 SFPQP23246 707 aaKnown RBP eCLIP19.93■□□□□ 0.78
SSB-201ENST00000260956 CDC25AP30304 524 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 PBX1P40424 430 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 DTHD1Q6ZMT9 781 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 STAMQ92783 540 aa19.93■□□□□ 0.78
SSB-201ENST00000260956 C16orf45Q96MC5 204 aaPredicted RBP19.93■□□□□ 0.78
SSB-201ENST00000260956 SEC63Q9UGP8 760 aaKnown RBP19.93■□□□□ 0.78
SSB-201ENST00000260956 OR52Z1P0C646 297 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms