RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 RGPD4Q7Z3J3 1758 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 YDJCA8MPS7 323 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 COPB1P53618 953 aaKnown RBP28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 PMS1P54277 932 aaKnown RBP28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 ASIC1P78348 528 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 AMPD3Q01432 767 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 TMEM179Q6ZVK1 233 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 MTERF4Q7Z6M4 381 aaKnown RBP28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 CCDC47Q96A33 483 aaKnown RBP28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 PRMT6Q96LA8 375 aaPredicted RBP28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 C7orf25Q9BPX7 421 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 PSMA7O14818 248 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 TUBB4AP04350 444 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 ABCB5Q2M3G0 1257 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 QRICH1Q2TAL8 776 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 PPP4R3AQ6IN85 833 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 PANX2Q96RD6 677 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 CAMKK2Q96RR4 588 aa28.84■■■□□ 2.21
ACTR3B-201ENST00000256001 PDE4DQ08499 809 aa28.83■■■□□ 2.21
ACTR3B-201ENST00000256001 RAB34Q9BZG1 259 aa28.83■■■□□ 2.21
ACTR3B-201ENST00000256001 EXOC1Q9NV70 894 aa28.83■■■□□ 2.21
ACTR3B-201ENST00000256001 GRB10Q13322 594 aa28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 DDX25Q9UHL0 483 aaKnown RBP28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 PCDHA1Q9Y5I3 950 aa28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 POTEMA6NI47 508 aa28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 ETF1P62495 437 aaKnown RBP28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 TOGARAM2Q6ZUX3 1019 aa28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 CDK5RAP3Q96JB5 506 aa28.82■■■□□ 2.2
ACTR3B-201ENST00000256001 ENTPD3O75355 529 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 PDIA5Q14554 519 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 IRF2BP1Q8IU81 584 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 ITIH6Q6UXX5 1313 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 F5H6K3 240 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 CASP14P31944 242 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 KLRC3Q07444 240 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 CDC37Q16543 378 aaPredicted RBP28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 SV2BQ7L1I2 683 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 TRIM47Q96LD4 638 aa28.81■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L15C9J2P7 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L13C9JLJ4 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L11C9JVI0 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L18D6R9N7 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L22D6RA61 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L17D6RBQ6 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L19D6RCP7 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L20D6RJB6 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L24Q0WX57 530 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 USP17L6PQ6QN14 398 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 PNMA5Q96PV4 448 aa28.8■■■□□ 2.2
ACTR3B-201ENST00000256001 NCBP1Q09161 790 aaKnown RBP28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 DHTKD1Q96HY7 919 aaPredicted RBP28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 SRRTQ9BXP5 876 aaKnown RBP28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 BLOC1S4Q9NUP1 217 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 DNAI1Q9UI46 699 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 ATF5Q9Y2D1 282 aaPredicted RBP28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 ATRNL1Q5VV63 1379 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 MFAP3LO75121 409 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 GYPCP04921 128 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 STK4Q13043 487 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 TRIM65Q6PJ69 517 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 SNX29Q8TEQ0 813 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 CSRNP1Q96S65 589 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 NUP88Q99567 741 aaPredicted RBP28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 STK17AQ9UEE5 414 aa28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.79■■■□□ 2.2
ACTR3B-201ENST00000256001 MARCH6O60337 910 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 TPM1P09493 284 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 KRT79Q5XKE5 535 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 ANKRD7Q92527 254 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 GLT8D2Q9H1C3 349 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 ZNF215Q9UL58 517 aaPredicted RBP28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 GH2P01242 217 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 FCER1AP12319 257 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 FXR1P51114 621 aaKnown RBP eCLIP28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 JAG1P78504 1218 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 MCM6Q14566 821 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 NAA30Q147X3 362 aaPredicted RBP28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 SYCP1Q15431 976 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 RBM26Q5T8P6 1007 aaKnown RBP28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 TTI2Q6NXR4 508 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 CNGA4Q8IV77 575 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 LARP4BQ92615 738 aaKnown RBP28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 PDGFDQ9GZP0 370 aaPredicted RBP28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 THAP9Q9H5L6 903 aa28.78■■■□□ 2.2
ACTR3B-201ENST00000256001 SOWAHDA6NJG2 315 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 UBXN1Q04323 297 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 MTF1Q14872 753 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 HAS1Q92839 578 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 GJA10Q969M2 543 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 NUDT12Q9BQG2 462 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 DESI2Q9BSY9 194 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 NAA15Q9BXJ9 866 aaKnown RBP28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 GCFC2P16383 781 aaKnown RBP28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 GMCL1P1Q8NEA9 526 aa28.77■■■□□ 2.2
ACTR3B-201ENST00000256001 NDUFB10O96000 172 aa28.76■■■□□ 2.19
ACTR3B-201ENST00000256001 EEF1GP26641 437 aaKnown RBP28.76■■■□□ 2.19
ACTR3B-201ENST00000256001 SNAP25P60880 206 aa28.76■■■□□ 2.19
ACTR3B-201ENST00000256001 IKQ13123 557 aaPredicted RBP28.76■■■□□ 2.19
ACTR3B-201ENST00000256001 PHLPP2Q6ZVD8 1323 aa28.76■■■□□ 2.19
ACTR3B-201ENST00000256001 GOLGA6L9A6NEM1 432 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms