RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 LRRCC1Q9C099 1032 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 DDX19BQ9UMR2 479 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 SQORQ9Y6N5 450 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 ABCB11O95342 1321 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 ZNF532Q9HCE3 1301 aa2.71□□□□□ -1.98
PRKD3-201ENST00000234179 A0A1W2PRG0 241 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 DYNC1LI2O43237 492 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 STAM2O75886 525 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 ICAM1P05362 532 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 ATF7P17544 494 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 SLC1A4P43007 532 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 GRB10Q13322 594 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 LAMC2Q13753 1193 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 ADGRE1Q14246 886 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MIGA1Q8NAN2 632 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PPM1EQ8WY54 764 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 APPBP2Q92624 585 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 EMID1Q96A84 441 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 RNF41Q9H4P4 317 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PAG1Q9NWQ8 432 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 IGKV6D-41A0A0C4DH26 115 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 GRXCR2A6NFK2 248 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MBD4O95243 580 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MRE11P49959 708 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TAP1Q03518 808 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 UBE3AQ05086 875 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 IKQ13123 557 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 HERC4Q5GLZ8 1057 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PTCRAQ6ISU1 281 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 OR6J1Q8NGC5 347 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 RHPN1Q8TCX5 695 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 NEK9Q8TD19 979 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 P2RX5Q93086 422 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TTC14Q96N46 770 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 HAUS7Q99871 368 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 AAASQ9NRG9 546 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 SLC4A4Q9Y6R1 1079 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MYH1P12882 1939 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 POTEB3A0JP26 581 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PROB1E7EW31 1015 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 LGR5O75473 907 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 GJB5O95377 273 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 IQCF3P0C7M6 154 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 POTEBQ6S5H4 581 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 KIAA1211Q6ZU35 1233 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 LRRC8DQ7L1W4 858 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 C16orf59Q7L2K0 433 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 FAM9BQ8IZU0 186 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 GPR161Q8N6U8 529 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 AGBL1Q96MI9 1066 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 NECTIN4Q96NY8 510 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 YBX2Q9Y2T7 364 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 SIPA1L1O43166 1804 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PGK2P07205 417 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 CA3P07451 260 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 STAG3L1P0CL83 205 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TSPY3P0CV98 308 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TSPY8P0CW00 308 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TGFB3P10600 412 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TDO2P48775 406 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 JAG1P78504 1218 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC96Q2M329 555 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 GIMAP8Q8ND71 665 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 EAF2Q96CJ1 260 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 KATNBL1Q9H079 304 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MTMR4Q9NYA4 1195 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 NDUFB9Q9Y6M9 179 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 ZMYM6O95789 1325 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 NAV1Q8NEY1 1877 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MYL3P08590 195 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TOP1P11387 765 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TIE1P35590 1138 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PLCD1P51178 756 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PURAQ00577 322 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 AAMPQ13685 434 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 DGKDQ16760 1214 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PRAMEF19Q5SWL8 479 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 CXCL17Q6UXB2 119 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 PI16Q6UXB8 463 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC144CPQ8IYA2 1237 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 UBALD2Q8IYN6 164 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 NSUN6Q8TEA1 469 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 ARNTL2Q8WYA1 636 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TRERF1Q96PN7 1200 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 A1CFQ9NQ94 594 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 CCPG1Q9ULG6 757 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 MRPL11Q9Y3B7 192 aaKnown RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC171Q6TFL3 1326 aa2.7□□□□□ -1.98
PRKD3-201ENST00000234179 TNRC18O15417 2968 aaPredicted RBP2.7□□□□□ -1.98
PRKD3-201ENST00000234179 ORC4O43929 436 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 TRIM27P14373 513 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 EDNRBP24530 442 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 ITGB8P26012 769 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 NHLH1Q02575 133 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 NONOQ15233 471 aaKnown RBP eCLIP2.69□□□□□ -1.98
PRKD3-201ENST00000234179 ALX1Q15699 326 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 FAM47CQ5HY64 1035 aa2.69□□□□□ -1.98
PRKD3-201ENST00000234179 AXDND1Q5T1B0 1012 aaPredicted RBP2.69□□□□□ -1.98
PRKD3-201ENST00000234179 TAF2Q6P1X5 1199 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms