RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ATP1A1P05023 1023 aaKnown RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 FCER1AP12319 257 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 ZBED6P86452 979 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 GPS2Q13227 327 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 COBLL1Q53SF7 1204 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 MIIPQ5JXC2 388 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 PAPD7Q5XG87 772 aaKnown RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 WDR93Q6P2C0 686 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 CERS3Q8IU89 383 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 HDAC6Q9UBN7 1215 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 KIAA1328Q86T90 577 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 JAKMIP2Q96AA8 810 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 EEF2KMTQ96G04 330 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 ZNHIT6Q9NWK9 470 aaKnown RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 EIF3CLB5ME19 914 aaKnown RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 KRT86O43790 486 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 EIF3JO75822 258 aaKnown RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 SMARCA1P28370 1054 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 TECP42680 631 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 MTIF2P46199 727 aaKnown RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 AMPD3Q01432 767 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 FIGNQ5HY92 759 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 CCDC170Q8IYT3 715 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 KIAA0895Q8NCT3 520 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 TBCKQ8TEA7 893 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 EXOC4Q96A65 974 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 ERGIC2Q96RQ1 377 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 EIF3CQ99613 913 aaKnown RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 NHEJ1Q9H9Q4 299 aaPredicted RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 PSD3Q9NYI0 1048 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 SEC63Q9UGP8 760 aaKnown RBP18.18■□□□□ 0.5
LTBR-201ENST00000228918 SAR1BQ9Y6B6 198 aa18.18■□□□□ 0.5
LTBR-201ENST00000228918 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 GYS2P54840 703 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 CNNM4Q6P4Q7 775 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 TEX11Q8IYF3 940 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 PIGSQ96S52 555 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 NOC4LQ9BVI4 516 aaKnown RBP18.17■□□□□ 0.5
LTBR-201ENST00000228918 ADAM21Q9UKJ8 722 aa18.17■□□□□ 0.5
LTBR-201ENST00000228918 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 ESYT2A0FGR8 921 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 RCCD1A6NED2 376 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 HNRNPH2P55795 449 aaKnown RBP18.16■□□□□ 0.5
LTBR-201ENST00000228918 CASP8Q14790 479 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 REXO1Q8N1G1 1221 aaKnown RBP18.16■□□□□ 0.5
LTBR-201ENST00000228918 CALML4Q96GE6 196 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 LACRTQ9GZZ8 138 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
LTBR-201ENST00000228918 USP14P54578 494 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 CDK17Q00537 523 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 CEP95Q96GE4 821 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
LTBR-201ENST00000228918 MMS19Q96T76 1030 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 FOCADQ5VW36 1801 aa18.16■□□□□ 0.5
LTBR-201ENST00000228918 NKRFO15226 690 aaKnown RBP eCLIP18.15■□□□□ 0.5
LTBR-201ENST00000228918 IPO7O95373 1038 aaKnown RBP18.15■□□□□ 0.5
LTBR-201ENST00000228918 NOVP48745 357 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 SEMA6BQ9H3T3 888 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 BIN2Q9UBW5 565 aaPredicted RBP18.15■□□□□ 0.5
LTBR-201ENST00000228918 GRB10Q13322 594 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 FKBP15Q5T1M5 1219 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 CENPPQ6IPU0 288 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 PCMTD1Q96MG8 357 aaPredicted RBP18.15■□□□□ 0.5
LTBR-201ENST00000228918 MTMR9Q96QG7 549 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 CD209Q9NNX6 404 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 BLOC1S4Q9NUP1 217 aa18.15■□□□□ 0.5
LTBR-201ENST00000228918 ANO9A1A5B4 782 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 SRGAP2O75044 1071 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 RHBDL3P58872 404 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 GPSM2P81274 684 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 IQCDQ96DY2 449 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 RPGRIP1Q96KN7 1286 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 RIOX1Q9H6W3 641 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 VAT1LQ9HCJ6 419 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 TMEM260Q9NX78 707 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 STK17AQ9UEE5 414 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 LY75O60449 1722 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 hCG_1984214I3L0E3 225 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 N4BP1O75113 896 aaKnown RBP18.14■□□□□ 0.49
LTBR-201ENST00000228918 PLCG2P16885 1265 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 CKAP4Q07065 602 aaKnown RBP18.14■□□□□ 0.49
LTBR-201ENST00000228918 SV2BQ7L1I2 683 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 ZNF713Q8N859 430 aaPredicted RBP18.14■□□□□ 0.49
LTBR-201ENST00000228918 CNBD1Q8NA66 436 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 SLC39A2Q9NP94 309 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 VPS18Q9P253 973 aa18.14■□□□□ 0.49
LTBR-201ENST00000228918 USP17L5A8MUK1 530 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 TXKP42681 527 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 FXR2P51116 673 aaKnown RBP eCLIP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms