RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ASCC2Q9H1I8 757 aaPredicted RBP18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 OSBPP22059 807 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 HOXA13P31271 388 aaPredicted RBP18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 PTGDRQ13258 359 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 AXDND1Q5T1B0 1012 aaPredicted RBP18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 SAMD3Q8N6K7 520 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 TRERF1Q96PN7 1200 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 TEX13BQ9BXU2 312 aa18.16■□□□□ 0.5
SNRPD3-201ENST00000215829 A0A1W2PQ27 194 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 A0A1W2PQ64 194 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 A0A1W2PQD8 194 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 EDIL3O43854 480 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 CCNT1O60563 726 aaKnown RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 PTPREP23469 700 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 ATP2C1P98194 919 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 GHRHRQ02643 423 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 ORC2Q13416 577 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 SNRNP48Q6IEG0 339 aaKnown RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 SAPCD2Q86UD0 394 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 C4orf32Q8N8J7 132 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 KRI1Q8N9T8 703 aaKnown RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 MAP3K20Q9NYL2 800 aaKnown RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 RIPK3Q9Y572 518 aa18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
SNRPD3-201ENST00000215829 NFIBO00712 420 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 CUTAO60888 179 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 STAT3P40763 770 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 HSD17B4P51659 736 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 USP11P51784 963 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 HERVK_113P62684 666 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 MKRN3Q13064 507 aaKnown RBP18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 TKFCQ3LXA3 575 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 HOMER2Q9NSB8 354 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.5
SNRPD3-201ENST00000215829 CCL15-CCL14A0A0B4J2E2 113 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 CCL15Q16663 113 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 CCAR1Q8IX12 1150 aaKnown RBP18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 CRYGNQ8WXF5 182 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 FERMT2Q96AC1 680 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 RNF146Q9NTX7 359 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 SLC45A1Q9Y2W3 748 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 MYH7BA7E2Y1 1941 aa18.14■□□□□ 0.49
SNRPD3-201ENST00000215829 A0A0G2JMZ2 1700 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 TOMM70O94826 608 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 CMA1P23946 247 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 ZNF157P51786 506 aaPredicted RBP18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 PLS1Q14651 629 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 ARL6IP4Q66PJ3 421 aaKnown RBP18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 PPP4R3AQ6IN85 833 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 BRI3BPQ8WY22 251 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 NAP1L4Q99733 375 aaKnown RBP18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 BTBD7Q9P203 1132 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 PNMA3Q9UL41 463 aa18.13■□□□□ 0.49
SNRPD3-201ENST00000215829 LAD1O00515 517 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 LIG1P18858 919 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 SREBF1P36956 1147 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 ARHGAP4P98171 946 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 RGMBQ6NW40 437 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 ZNF579Q8NAF0 562 aaKnown RBP18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 CLIC6Q96NY7 704 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 BTBD19C9JJ37 291 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 NEMFO60524 1076 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 ANKRD23Q86SG2 305 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 RASAL3Q86YV0 1011 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 MRPS27Q92552 414 aaKnown RBP18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 MAF1Q9H063 256 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 TLL2Q9Y6L7 1015 aa18.12■□□□□ 0.49
SNRPD3-201ENST00000215829 CYP3A7-CYP3A51PA0A087WV96 503 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 PDHXO00330 501 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 TDP2O95551 362 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 CYP3A7P24462 503 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 GRIN1Q05586 938 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 SHC4Q6S5L8 630 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 MOXD1Q6UVY6 613 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 RIOX2Q8IUF8 465 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 FSIP1Q8NA03 581 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 GOLPH3LQ9H4A5 285 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 EHMT1Q9H9B1 1298 aa18.11■□□□□ 0.49
SNRPD3-201ENST00000215829 CNMDO75829 334 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 CYP3A4P08684 503 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 PRPHP41219 470 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 RPS6P62753 249 aaKnown RBP18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 RESP18Q5W5W9 173 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 RNF207Q6ZRF8 634 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 CHST13Q8NET6 341 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 SYTL5Q8TDW5 730 aaPredicted RBP18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 SPATC1LQ9H0A9 340 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 ACAD9Q9H845 621 aa18.1■□□□□ 0.49
SNRPD3-201ENST00000215829 RBPJLQ9UBG7 517 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms