RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CABS1Q96KC9 395 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 SPAG5Q96R06 1193 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 OSBPL9Q96SU4 736 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 SELENOSQ9BQE4 189 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.437e-7■■■□□ 15.2
ACTN1-201ENST00000193403 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 TSPY3P0CV98 308 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 TSPY8P0CW00 308 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 AMPD3Q01432 767 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 PICALMQ13492 652 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 NAA35Q5VZE5 725 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 UHMK1Q8TAS1 419 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 MEGF6O75095 1541 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 KCNK3O14649 394 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 EIF3HO15372 352 aaKnown RBP eCLIP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 TCP1P17987 556 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 HNRNPH1P31943 449 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 ATP2C1P98194 919 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 TFAP4Q01664 338 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 TACC3Q9Y6A5 838 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 ITIH6Q6UXX5 1313 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 APTXQ7Z2E3 356 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 PHF20Q9BVI0 1012 aa12.39□□□□□ -0.43
ACTN1-201ENST00000193403 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
ACTN1-201ENST00000193403 MST1RQ04912 1400 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 NR1D1P20393 614 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 AMPD2Q01433 879 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 CEP89Q96ST8 783 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 LRRC53A6NM62 1247 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 OR2W6PQ8NHA6 318 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 NCAPGQ9BPX3 1015 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 GOLPH3Q9H4A6 298 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 VIPAS39Q9H9C1 493 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 OVOS2A0A0G2JMS6 1433 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 TNNI2P48788 182 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 POLR2FP61218 127 aaKnown RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 CHRNDQ07001 517 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 STK4Q13043 487 aa12.38□□□□□ -0.43
ACTN1-201ENST00000193403 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
ACTN1-201ENST00000193403 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 LONP1P36776 959 aaKnown RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 EVX2Q03828 476 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 ADSSL1Q8N142 457 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 TBC1D31Q96DN5 1066 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 PLCD4Q9BRC7 762 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 CD248Q9HCU0 757 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 PBX1P40424 430 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 SLC1A4P43007 532 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 NAA25Q14CX7 972 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 PKN1Q16512 942 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 PNMA1Q8ND90 353 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 AP1M1Q9BXS5 423 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
ACTN1-201ENST00000193403 BAIAP2L1Q9UHR4 511 aa12.37□□□□□ -0.43
ACTN1-201ENST00000193403 CCNE1P24864 410 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 TNNC1P63316 161 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 DNAAF5Q86Y56 855 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 DYDC1Q8WWB3 177 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 FGFR1OPO95684 399 aaKnown RBP12.36□□□□□ -0.43
ACTN1-201ENST00000193403 PDE6BP35913 854 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 ALX1Q15699 326 aa12.36□□□□□ -0.43
ACTN1-201ENST00000193403 TMEM266Q2M3C6 531 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms