RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Lrriq3Q14DL3 633 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Rnf40Q3U319 1001 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ppp2r5cQ60996 524 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Sulf1Q8K007 870 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Col15a1O35206 1367 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ctnna1P26231 906 aaKnown RBP13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Pde6aP27664 859 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Sept1P42209 366 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Zscan2Q07230 614 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Mybpc2Q5XKE0 1136 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Abi1Q8CBW3 481 aa13.23□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Gm6657A0A1B0GRJ3 277 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Xbp1O35426 267 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 IqceQ6PCQ0 778 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 AsphQ8BSY0 741 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ppp4r1Q8K2V1 951 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Popdc2Q9ES82 367 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ubn2Q80WC1 1314 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Spata31d1bE9QA57 1361 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 DgkiD3YWQ0 1071 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Sept2P42208 361 aaKnown RBP13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Polr2fP61219 127 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Rgl1Q60695 768 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 IdeQ9JHR7 1019 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Efcc1Q9JJF6 558 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Akt3Q9WUA6 479 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Clrn2B2RVW2 232 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Cyp2c23E9Q5K4 494 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ireb2Q811J3 963 aaKnown RBP13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Susd4Q8BH32 490 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ccdc152E9PX14 254 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Elmsan1E9Q2I4 1089 aaKnown RBP13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Gm6583E9Q8Z1 469 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Nedd9O35177 833 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Pgrmc1O55022 195 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 GalcP54818 684 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Eepd1Q3TGW2 569 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Srp68Q8BMA6 625 aaKnown RBP13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Cyp2d12Q8BVD2 504 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Pus7lQ8CE46 702 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Dpf1Q9QX66 387 aa13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Twf2Q9Z0P5 349 aaKnown RBP13.22□□□□□ -0.29
Col8a1-201ENSMUST00000089332 CopeO89079 308 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Tsta3P23591 321 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Gm10488Q4KL05 212 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Msh6P54276 1358 aaKnown RBP13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Rnf17Q99MV7 1640 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Btn2a2A4QPC6 514 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Lrrc8aQ80WG5 810 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Rcor2Q8C796 523 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Ppp2r5dQ91V89 594 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Cnpy3Q9DAU1 276 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Tmem2Q5FWI3 1383 aa13.21□□□□□ -0.29
Col8a1-201ENSMUST00000089332 Stk10O55098 966 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Adcy7P51829 1099 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Trmt10cQ3UFY8 414 aaKnown RBP13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ccdc92bQ5SUE3 299 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Tsc1Q9EP53 1161 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Aox2Q5SGK3 1345 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Tex13c2A0A0G2JGA3 530 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Serpinb8O08800 374 aaKnown RBP13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Gm14685Q52KH6 695 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Acap3Q6NXL5 833 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Clasp2Q8BRT1 1286 aaKnown RBP13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Krt222Q8CCX5 294 aa13.21□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Lekr1B2RVN1 116 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Krt78E9Q0F0 1068 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Plekha5E9Q6H8 1269 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Rtel1Q0VGM9 1203 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Kiaa1468Q148V7 1216 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Avpr1aQ62463 423 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Nme8Q715T0 586 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Zcchc18Q8VD24 393 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Psmg1Q9JK23 289 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Veph1A1A535 833 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Rsph10bE9PYQ0 876 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Zfp94E9Q6Y4 486 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Usp28Q5I043 1051 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Serpinb3dQ6UKZ0 387 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 IcoslgQ9JHJ8 322 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cdk12Q14AX6 1484 aaKnown RBP13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Atf2P16951 487 aaKnown RBP13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Xxylt1Q3U4G3 392 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Slc10a4Q3UEZ8 437 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Akap7Q7TN79 314 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Wdr3Q8BHB4 942 aaKnown RBP13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Spire2Q8K1S6 718 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Snrnp35Q9D384 244 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Mmrn2A6H6E2 943 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Zfp174B9EJW5 407 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Enc1O35709 589 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 CatspereP0DP43 985 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cd22P35329 862 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 C87499Q3UX49 493 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Fam228bQ497Q6 232 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 EsrrbQ61539 433 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Dync1li2Q6PDL0 492 aaKnown RBP13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ehd2Q8BH64 543 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cdk8Q8R3L8 464 aa13.2□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Nrbp1Q99J45 535 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms