RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	NDUFA10	O95299	355 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ASIC1	P78348	528 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	LONRF2	Q1L5Z9	754 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	MFSD14B	Q5SR56	506 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	TRAPPC3L	Q5T215	181 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ZMYND12	Q9H0C1	365 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ROBO3	Q96MS0	1386 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	DDX60L	Q5H9U9	1706 aa	Known RBP	18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	OR52Z1	P0C646	297 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	OAS2	P29728	719 aa	Known RBP	18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	HERVK_113	P62684	666 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ZNF804A	Q7Z570	1209 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ANKRD20A12P	Q8NF67	263 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	CCDC148	Q8NFR7	591 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	MXD3	Q9BW11	206 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	TRIM9	Q9C026	710 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ARFGAP3	Q9NP61	516 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	SLC39A2	Q9NP94	309 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	NAV1	Q8NEY1	1877 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	RHOBTB3	O94955	611 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	PPP4C	P60510	307 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	CYP27A1	Q02318	531 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	SPAG1	Q07617	926 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	AMOTL1	Q8IY63	956 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	GLIS3	Q8NEA6	775 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	HINFP	Q9BQA5	517 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	NUDT12	Q9BQG2	462 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	CCSER1	Q9C0I3	900 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	CDK5RAP2	Q96SN8	1893 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597		H3BQF6	201 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	GNAQ	P50148	359 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	RHBDL3	P58872	404 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	DYM	Q7RTS9	669 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	CCDC51	Q96ER9	411 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	TUBGCP2	Q9BSJ2	902 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	LACRT	Q9GZZ8	138 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	POLL	Q9UGP5	575 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	TTF2	Q9UNY4	1162 aa	Known RBP	18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	LEMD3	Q9Y2U8	911 aa		18.87	■□□□□ 0.61
PHGDH-223	ENST00000641597	MYH1	P12882	1939 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	POTEM	A6NI47	508 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	PSMA7	O14818	248 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	SLC37A4	O43826	429 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	EDIL3	O43854	480 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	TDP2	O95551	362 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	PLEK	P08567	350 aa	Predicted RBP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	MCM6	Q14566	821 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	SMC1A	Q14683	1233 aa	Known RBP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	DAGLB	Q8NCG7	672 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	KIAA0895	Q8NCT3	520 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	LUC7L2	Q9Y383	392 aa	Known RBP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	NONO	Q15233	471 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	C16orf86	Q6ZW13	317 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	OR8K1	Q8NGG5	319 aa		18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	RPGR	Q92834	1020 aa	Known RBP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	NAPG	Q99747	312 aa	Predicted RBP	18.86	■□□□□ 0.61
PHGDH-223	ENST00000641597	RIMBP2	O15034	1052 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	VSNL1	P62760	191 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	ATP2B2	Q01814	1243 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	VPS72	Q15906	364 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	NEK11	Q8NG66	645 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	PYM1	Q9BRP8	204 aa	Known RBP	18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	GPCPD1	Q9NPB8	672 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	TCP11L1	Q9NUJ3	509 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	EPHB6	O15197	1021 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	GSTO1	P78417	241 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	KCNB1	Q14721	858 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	NEK8	Q86SG6	692 aa		18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	CNOT6L	Q96LI5	555 aa	Known RBP	18.85	■□□□□ 0.61
PHGDH-223	ENST00000641597	GPR75-ASB3	A0A0A6YYF3	556 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	N4BP1	O75113	896 aa	Known RBP	18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	ATP1A1	P05023	1023 aa	Known RBP	18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	TRIM21	P19474	475 aa	Known RBP	18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	KRT26	Q7Z3Y9	468 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	NEDD1	Q8NHV4	660 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	CAPZA3	Q96KX2	299 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	UBXN6	Q9BZV1	441 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	SEMA6B	Q9H3T3	888 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	ABCB6	Q9NP58	842 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	AMPD2	Q01433	879 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	P2RX5	Q93086	422 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	RRP36	Q96EU6	259 aa	Known RBP	18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	DNAJC7	Q99615	494 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	SPZ1	Q9BXG8	430 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	EXOC1	Q9NV70	894 aa		18.84	■□□□□ 0.61
PHGDH-223	ENST00000641597	TBC1D8B	Q0IIM8	1120 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	UBE2S	Q16763	222 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	MIIP	Q5JXC2	388 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	KCNK18	Q7Z418	384 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	C6orf229	H3BNL8	230 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	AKR1B1	P15121	316 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	SLC16A2	P36021	539 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	LRRC41	Q15345	812 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	CCDC122	Q5T0U0	273 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	TTBK2	Q6IQ55	1244 aa		18.83	■□□□□ 0.6

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