RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 KCNQ5Q9NR82 932 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 EXOC1Q9NV70 894 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 PDS5AQ29RF7 1337 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 GPR75-ASB3A0A0A6YYF3 556 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 SLC37A4O43826 429 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 MARCH6O60337 910 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 PNMA6AP0CW24 399 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 TAL1P17542 331 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 MTIF2P46199 727 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 MCM6Q14566 821 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 LRRC41Q15345 812 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 NEK8Q86SG6 692 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 RBM17Q96I25 401 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 NUDT12Q9BQG2 462 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 AGPAT5Q9NUQ2 364 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 MAGEC2Q9UBF1 373 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 LIMA1Q9UHB6 759 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 TTF2Q9UNY4 1162 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 LAMB2P55268 1798 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 PSMA7O14818 248 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 ATP2B4P23634 1241 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 ANKRD40Q6AI12 368 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 REXO1Q8N1G1 1221 aaKnown RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 GLIS3Q8NEA6 775 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 NEDD1Q8NHV4 660 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 PARD6BQ9BYG5 372 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 TBC1D7Q9P0N9 293 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 FHOD1Q9Y613 1164 aa8.6□□□□□ -1.03
NECAP1-224ENST00000640099 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-224ENST00000640099 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 EFCAB8A8MWE9 144 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-224ENST00000640099 STIM1Q13586 685 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-224ENST00000640099 SH3GLB2Q9NR46 395 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 HDAC6Q9UBN7 1215 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 SNED1Q8TER0 1413 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 RREB1Q92766 1687 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 SRGAP2O75044 1071 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 PDHBP11177 359 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
NECAP1-224ENST00000640099 RBM5P52756 815 aaKnown RBP eCLIP8.59□□□□□ -1.03
NECAP1-224ENST00000640099 GYS2P54840 703 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 CYP27A1Q02318 531 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 NCAPH2Q6IBW4 605 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 ZFPM1Q8IX07 1006 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 FNBP4Q8N3X1 1017 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-224ENST00000640099 CERS5Q8N5B7 392 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 MB21D1Q8N884 522 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 CDK5RAP3Q96JB5 506 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 TRIM9Q9C026 710 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 ZMYND12Q9H0C1 365 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 DBNDD1Q9H9R9 158 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 ZNF287Q9HBT7 754 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
NECAP1-224ENST00000640099 ARGLU1Q9NWB6 273 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-224ENST00000640099 SASH3O75995 380 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 GNA11P29992 359 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 SPAG1Q07617 926 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 TBC1D8BQ0IIM8 1120 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 NFIAQ12857 509 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.04
NECAP1-224ENST00000640099 CALCRLQ16602 461 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 KRT25Q7Z3Z0 450 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 CNOT6LQ96LI5 555 aaKnown RBP8.59□□□□□ -1.04
NECAP1-224ENST00000640099 TUBGCP2Q9BSJ2 902 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 MMTAG2Q9BU76 263 aaKnown RBP8.59□□□□□ -1.04
NECAP1-224ENST00000640099 KANSL2Q9H9L4 492 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 SUGCTQ9HAC7 445 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 POLD4Q9HCU8 107 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.04
NECAP1-224ENST00000640099 LUC7L2Q9Y383 392 aaKnown RBP8.59□□□□□ -1.04
NECAP1-224ENST00000640099 AFF2P51816 1311 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 H7C1D1 291 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-224ENST00000640099 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 CYP26C1Q6V0L0 522 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-224ENST00000640099 ANKS1AQ92625 1134 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 DRC1Q96MC2 740 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 DUSP9Q99956 384 aaKnown RBP8.58□□□□□ -1.04
NECAP1-224ENST00000640099 KBTBD4Q9NVX7 518 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 CTAGE9A4FU28 777 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 TUBB4AP04350 444 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
NECAP1-224ENST00000640099 TTI2Q6NXR4 508 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 KCNK18Q7Z418 384 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 TMTC1Q8IUR5 882 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 GOLGA1Q92805 767 aa8.58□□□□□ -1.04
NECAP1-224ENST00000640099 PYM1Q9BRP8 204 aaKnown RBP8.58□□□□□ -1.04
NECAP1-224ENST00000640099 NOC4LQ9BVI4 516 aaKnown RBP8.58□□□□□ -1.04
NECAP1-224ENST00000640099 SPZ1Q9BXG8 430 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms