RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 GAS7O60861 476 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 ARMC2Q8NEN0 867 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 CLIC6Q96NY7 704 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 TBX22Q9Y458 520 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 ITKQ08881 620 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 KRT81Q14533 505 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 KAZNQ674X7 775 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 ZNF280CQ8ND82 737 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 PIP4K2CQ8TBX8 421 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 CALR3Q96L12 384 aaKnown RBP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 PZPP20742 1482 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 COBLO75128 1261 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 ADD1P35611 737 aaKnown RBP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 IFRD2Q12894 506 aaPredicted RBP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 BLIDQ8IZY5 108 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 SYF2O95926 243 aaKnown RBP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 GTF2IP78347 998 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 GYG1P46976 350 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 IFNAR2P48551 515 aa13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 BRDTQ58F21 947 aaPredicted RBP13.78□□□□□ -0.2
CHRNA7-225ENST00000637189 THAP12O43422 761 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 DNM2P50570 870 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 RCN2Q14257 317 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 MYOCDQ8IZQ8 938 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 P3H4Q92791 437 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 EAF2Q96CJ1 260 aaPredicted RBP13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 RIOK1Q9BRS2 568 aaKnown RBP13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 SMYD2Q9NRG4 433 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 KIAA0556O60303 1618 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 ZMYM6O95789 1325 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 GNA14O95837 355 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 TSTA3Q13630 321 aaPredicted RBP13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 PDCD2Q16342 344 aaPredicted RBP13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 TMTC4Q5T4D3 741 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 USP44Q9H0E7 712 aa13.77□□□□□ -0.2
CHRNA7-225ENST00000637189 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 ABL1P00519 1130 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 BCAMP50895 628 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 TCIRG1Q13488 830 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 CHAMP1Q96JM3 812 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 ABCC4O15439 1325 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 MMEL1Q495T6 779 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 BCAP29Q9UHQ4 241 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 KDRP35968 1356 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 NPC1L1Q9UHC9 1359 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 PFKFB2O60825 505 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 KRT3P12035 628 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 OR8K1Q8NGG5 319 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 MTMR6Q9Y217 621 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
CHRNA7-225ENST00000637189 MFSD14BQ5SR56 506 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 STAT1P42224 750 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 MAGEA9P43362 315 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 FOXD4Q12950 439 aaPredicted RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 LRRC47Q8N1G4 583 aaKnown RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 CLIC4Q9Y696 253 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 SYNJ2BP-COX16A0A087WUM0 186 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 LRRC24Q50LG9 513 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 COX16Q9P0S2 106 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 PMS1P54277 932 aaKnown RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 MAP3K21Q5TCX8 1036 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 NOP9Q86U38 636 aaKnown RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 GPT2Q8TD30 523 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 FANCLQ9NW38 375 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 WDR62O43379 1518 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 MAN1A2O60476 641 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 EEF1DP29692 281 aaKnown RBP13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 NDUFA8P51970 172 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 C16orf87Q6PH81 154 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 TRIM58Q8NG06 486 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
CHRNA7-225ENST00000637189 ZSWIM6Q9HCJ5 1215 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms