RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SMIM22K7EJ46 135 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 HSPA6P17066 643 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 HOXA7P31268 230 aaPredicted RBP7.83□□□□□ -1.16
UPF3B-205ENST00000636792 MAP2K2P36507 400 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 ZNF157P51786 506 aaPredicted RBP7.83□□□□□ -1.16
UPF3B-205ENST00000636792 NEK4P51957 841 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 TROAPQ12815 778 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 PRKG1Q13976 671 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 OTUD7BQ6GQQ9 843 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 CPLX2Q6PUV4 134 aaKnown RBP7.83□□□□□ -1.16
UPF3B-205ENST00000636792 NFXL1Q6ZNB6 911 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 FAM160B2Q86V87 743 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 ZNF713Q8N859 430 aaPredicted RBP7.83□□□□□ -1.16
UPF3B-205ENST00000636792 CTCFLQ8NI51 663 aaPredicted RBP7.83□□□□□ -1.16
UPF3B-205ENST00000636792 SNX21Q969T3 373 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 TMEM47Q9BQJ4 181 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 LZTS2Q9BRK4 669 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 UPF3BQ9BZI7 483 aaKnown RBP7.83□□□□□ -1.16
UPF3B-205ENST00000636792 MAF1Q9H063 256 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 ELP3Q9H9T3 547 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 CLIP2Q9UDT6 1046 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 AGTPBP1Q9UPW5 1226 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 SLC12A7Q9Y666 1083 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 ZHX2Q9Y6X8 837 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 F5H6K3 240 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 IRF6O14896 467 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 ZBTB43O43298 467 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 CDKL5O76039 1030 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 PDHBP11177 359 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 VCAM1P19320 739 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 SLC1A4P43007 532 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 STAT2P52630 851 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 AK2P54819 239 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 C1QTNF8P60827 252 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 KLRC3Q07444 240 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 SPP2Q13103 211 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 MTMR2Q13614 643 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 TOB2Q14106 344 aaPredicted RBP7.82□□□□□ -1.16
UPF3B-205ENST00000636792 GRM4Q14833 912 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 DEFB115Q30KQ5 88 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 LBX2Q6XYB7 198 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 Q6ZUG5 572 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 ANKRD23Q86SG2 305 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 ZNF654Q8IZM8 581 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 MB21D1Q8N884 522 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 RGS22Q8NE09 1264 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 CHURC1Q8WUH1 139 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 BRF1Q92994 677 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 CLMNQ96JQ2 1002 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 SPZ1Q9BXG8 430 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 CFHR5Q9BXR6 569 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 FEM1BQ9UK73 627 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 LIMCH1Q9UPQ0 1083 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 COL11A1P12107 1806 aaPredicted RBP7.82□□□□□ -1.16
UPF3B-205ENST00000636792 ZNF236Q9UL36 1845 aa7.82□□□□□ -1.16
UPF3B-205ENST00000636792 KLF18A0A0U1RQI7 1052 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 A0A1W2PRG0 241 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 GOLGA8BA8MQT2 603 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 FAM155AB1AL88 458 aaPredicted RBP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 NMT2O60551 498 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 NDUFB10O96000 172 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 PARP1P09874 1014 aaKnown RBP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 BMP3P12645 472 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 PDIA4P13667 645 aaKnown RBP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 COPB2P35606 906 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 METAP2P50579 478 aaKnown RBP eCLIP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 OAZ1P54368 228 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 JAG1P78504 1218 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 SKOR1P84550 965 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 FMR1Q06787 632 aaKnown RBP eCLIP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 ZNF543Q08ER8 600 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 SLFN13Q68D06 897 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 BTNL9Q6UXG8 535 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 MOB2Q70IA6 237 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 SIAH1Q8IUQ4 282 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 LRRC47Q8N1G4 583 aaKnown RBP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 ZKSCAN3Q9BRR0 538 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 LLPHQ9BRT6 129 aaKnown RBP7.81□□□□□ -1.16
UPF3B-205ENST00000636792 INCENPQ9NQS7 918 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 KIF3AQ9Y496 699 aa7.81□□□□□ -1.16
UPF3B-205ENST00000636792 STK36Q9NRP7 1315 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 TRIM75PA6NK02 468 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 GOLGA8AA7E2F4 631 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 CAPN5O15484 640 aaPredicted RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 CA12O43570 354 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 PFKFB2O60825 505 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 SLURP2P0DP57 97 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 IFNAR1P17181 557 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 PDIA3P30101 505 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms