RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 DNAJC25Q9H1X3 360 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 SERTAD1Q9UHV2 236 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 UTRNP46939 3433 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 MEIS2O14770 477 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 USP11P51784 963 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 NLRP12P59046 1061 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 FAM83BQ5T0W9 1011 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 LPAR1Q92633 364 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 AK8Q96MA6 479 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 BPIFA3Q9BQP9 254 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 WDR18Q9BV38 432 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 NAT10Q9H0A0 1025 aaKnown RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 PITPNM2Q9BZ72 1349 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 FOSP01100 380 aaPredicted RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 YBX3P16989 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 IQUBQ8NA54 791 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 ERCC4Q92889 916 aaPredicted RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 GLIS2Q9BZE0 524 aaPredicted RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 CCSER1Q9C0I3 900 aa13.32□□□□□ -0.28
CCDC163-201ENST00000625766 ADARB2Q9NS39 739 aaKnown RBP13.32□□□□□ -0.28
CCDC163-201ENST00000625766 SBF1O95248 1867 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 A0A087X0B3 334 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 DDNO94850 711 aaPredicted RBP13.31□□□□□ -0.28
CCDC163-201ENST00000625766 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
CCDC163-201ENST00000625766 E2F4Q16254 413 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 SUPT20HL1Q3ZLR7 823 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 PCDHA5Q9Y5H7 936 aa13.31□□□□□ -0.28
CCDC163-201ENST00000625766 CYP3A7-CYP3A51PA0A087WV96 503 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 NEMFO60524 1076 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
CCDC163-201ENST00000625766 CYP3A7P24462 503 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 PNOCQ13519 176 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 PDIA5Q14554 519 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 POSTNQ15063 836 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 CRYGNQ8WXF5 182 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
CCDC163-201ENST00000625766 INPP5BP32019 993 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 UBE2SQ16763 222 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 MOXD1Q6UVY6 613 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 C11orf57Q6ZUT1 292 aaPredicted RBP13.3□□□□□ -0.28
CCDC163-201ENST00000625766 LUZP1Q86V48 1076 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 PDILTQ8N807 584 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 MBOAT7Q96N66 472 aa13.3□□□□□ -0.28
CCDC163-201ENST00000625766 LMOD1P29536 600 aaPredicted RBP13.29□□□□□ -0.28
CCDC163-201ENST00000625766 TXLNAP40222 546 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC163-201ENST00000625766 USP14P54578 494 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 SNAP25P60880 206 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 HS1BP3Q53T59 392 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 C9orf131Q5VYM1 1079 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 TRIML1Q8N9V2 468 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
CCDC163-201ENST00000625766 PAGE5Q96GU1 130 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 GGA3Q9NZ52 723 aa13.29□□□□□ -0.28
CCDC163-201ENST00000625766 OPLAHO14841 1288 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 FOXN1O15353 648 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 DHX58Q96C10 678 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 AS3MTQ9HBK9 375 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 SMC2O95347 1197 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 PTPRAP18433 802 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 UBA7P41226 1012 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 BACE1P56817 501 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 CALCRLQ16602 461 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
CCDC163-201ENST00000625766 NOL9Q5SY16 702 aaKnown RBP13.28□□□□□ -0.28
CCDC163-201ENST00000625766 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 PDXDC2PQ6P474 469 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 CCDC84Q86UT8 332 aaPredicted RBP13.28□□□□□ -0.28
CCDC163-201ENST00000625766 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
CCDC163-201ENST00000625766 KIFC2Q96AC6 838 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 L3MBTL3Q96JM7 780 aaPredicted RBP13.28□□□□□ -0.28
CCDC163-201ENST00000625766 FEZ1Q99689 392 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
CCDC163-201ENST00000625766 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
CCDC163-201ENST00000625766 AP5Z1O43299 807 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 ADCY5O95622 1261 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 FDX1P10109 184 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms