RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 STAT2P52630 851 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 ERVK-24P63145 666 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FGD1P98174 961 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 KIAA1755Q5JYT7 1200 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FBXO46Q6PJ61 603 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 NFXL1Q6ZNB6 911 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 KCTD1Q719H9 257 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FAM160B2Q86V87 743 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 MB21D1Q8N884 522 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 ATG4CQ96DT6 458 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 TTC14Q96N46 770 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 TMEM47Q9BQJ4 181 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 ARHGAP39Q9C0H5 1083 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 IL17RBQ9NRM6 502 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 TCP11L1Q9NUJ3 509 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FBXO28Q9NVF7 368 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FEM1BQ9UK73 627 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 RABGAP1Q9Y3P9 1069 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 TACC3Q9Y6A5 838 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 MGAMO43451 1857 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FRMPD2Q68DX3 1309 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 MYPNQ86TC9 1320 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 TMEM232C9JQI7 657 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 ZBED4O75132 1171 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 MCM5P33992 734 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 PRMT2P55345 433 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 KRT32Q14532 448 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 WTAPQ15007 396 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 SLC9C1Q4G0N8 1177 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 BRICD5Q6PL45 260 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 DGKHQ86XP1 1220 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 CPXCR1Q8N123 301 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 ENAHQ8N8S7 591 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 PRPF38AQ8NAV1 312 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 PNMA1Q8ND90 353 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 CHURC1Q8WUH1 139 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 DCAF4Q8WV16 495 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 MKL1Q969V6 931 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 TRIM47Q96LD4 638 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 MORF4L1Q9UBU8 362 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 PPP1R9AQ9ULJ8 1098 aa8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 NAP1L2Q9ULW6 460 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-221ENST00000625705 A0A0G2JMZ2 1700 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 PRC1O43663 620 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 PEX10O60683 326 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 CD46P15529 392 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 PRKCZQ05513 592 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 RCSD1Q6JBY9 416 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 SYNE3Q6ZMZ3 975 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 CYB5R4Q7L1T6 521 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 CATIPQ7Z7H3 387 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 NBPF11Q86T75 865 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 SOCS4Q8WXH5 440 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 NEK1Q96PY6 1258 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 NUDT12Q9BQG2 462 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 SPATC1LQ9H0A9 340 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 TXNRD2Q9NNW7 524 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 RBPJLQ9UBG7 517 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 SRRDQ9UH36 339 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 PTPN22Q9Y2R2 807 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 FCF1Q9Y324 198 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 PTCH2Q9Y6C5 1203 aa8.44□□□□□ -1.06
NPLOC4-221ENST00000625705 COL11A1P12107 1806 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PARP14Q460N5 1801 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 VWA5AO00534 786 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 GDF9O60383 454 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 MYCP01106 439 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 HMGB1P09429 215 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PARP1P09874 1014 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PDHBP11177 359 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 COPB2P35606 906 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 SLC16A2P36021 539 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 FLT3LGP49771 235 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PRR20EP86478 221 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PRR20CP86479 221 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PRR20DP86480 221 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PRR20BP86481 221 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PRR20AP86496 221 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 NECTIN1Q15223 517 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 PKDCCQ504Y2 493 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 ASPRV1Q53RT3 343 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 GPATCH4Q5T3I0 446 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 SYDE2Q5VT97 1194 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 SNRNP48Q6IEG0 339 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
NPLOC4-221ENST00000625705 LBX2Q6XYB7 198 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms