RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 JAKMIP1Q96N16 626 aaKnown RBP23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 NEK1Q96PY6 1258 aa23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 RNF146Q9NTX7 359 aa23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 PRKAG2Q9UGJ0 569 aa23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 ZHX1Q9UKY1 873 aaPredicted RBP23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 MTMR7Q9Y216 660 aa23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 CCDC96Q2M329 555 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 CYB5R4Q7L1T6 521 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 DCAF4Q8WV16 495 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 IL17RAQ96F46 866 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 AGBL1Q96MI9 1066 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 TBC1D32Q96NH3 1257 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 LBHD1Q9BQE6 289 aaPredicted RBP23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 FAM184BQ9ULE4 1060 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 PRR12Q9ULL5 1215 aa23.31■■□□□ 1.32
R3HCC1-210ENST00000625275 TKFCQ3LXA3 575 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 LRIT3Q3SXY7 679 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 TRIM60Q495X7 471 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 TCP11L1Q9NUJ3 509 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 SYNRGQ9UMZ2 1314 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 ADAMTS4O75173 837 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 TOP1P11387 765 aaKnown RBP23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 ANTXR2P58335 489 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 C1orf53Q5VUE5 145 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 CCDC174Q6PII3 467 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 ZKSCAN3Q9BRR0 538 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 ABHD16BQ9H3Z7 469 aa23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 A1CFQ9NQ94 594 aaKnown RBP23.3■■□□□ 1.32
R3HCC1-210ENST00000625275 POTEB2H3BUK9 544 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 ALAS1P13196 640 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 CASTP20810 708 aaKnown RBP23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 ACVR2BQ13705 512 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 ARMCX2Q7L311 632 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 CHST3Q7LGC8 479 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 FAM133AQ8N9E0 248 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 TRERF1Q96PN7 1200 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 TMEM47Q9BQJ4 181 aa23.29■■□□□ 1.32
R3HCC1-210ENST00000625275 CPA1P15085 419 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 PSMA5P28066 241 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 MCM5P33992 734 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 SNAP25P60880 206 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 CNTN2Q02246 1040 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 IQCA1Q86XH1 822 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 KIF2CQ99661 725 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 TM6SF1Q9BZW5 370 aa23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 PRDM5Q9NQX1 630 aaPredicted RBP23.28■■□□□ 1.32
R3HCC1-210ENST00000625275 A0A1W2PQ45 241 aaPredicted RBP23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 A0A1W2PQY0 241 aa23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 DUSP11O75319 330 aaKnown RBP23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 HMGB1P09429 215 aaKnown RBP23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 BLOC1S2Q6QNY1 142 aa23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 CCDC144CPQ8IYA2 1237 aa23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 TSEN34Q9BSV6 310 aaKnown RBP23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 PDLIM7Q9NR12 457 aa23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 CCPG1Q9ULG6 757 aa23.27■■□□□ 1.32
R3HCC1-210ENST00000625275 PRC1O43663 620 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 CCDC144BQ3MJ40 725 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 TTBK2Q6IQ55 1244 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 GPR153Q6NV75 609 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 BTNL9Q6UXG8 535 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 DHX32Q7L7V1 743 aaKnown RBP23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 TCEANC2Q96MN5 208 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 ZSCAN10Q96SZ4 725 aaPredicted RBP23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 UBAC1Q9BSL1 405 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 UPF3BQ9BZI7 483 aaKnown RBP23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 RANBP17Q9H2T7 1088 aaKnown RBP23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 ZSWIM6Q9HCJ5 1215 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 TNKSO95271 1327 aa23.26■■□□□ 1.31
R3HCC1-210ENST00000625275 ICAM1P05362 532 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 SLC16A2P36021 539 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 EXOSC10Q01780 885 aaKnown RBP23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 MUM1L1Q5H9M0 696 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 SYDE2Q5VT97 1194 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 KLHDC9Q8NEP7 349 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 KATNBL1Q9H079 304 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 FRMPD2Q68DX3 1309 aaPredicted RBP23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
R3HCC1-210ENST00000625275 ADCY6O43306 1168 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 PDHBP11177 359 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 RPS6KB1P23443 525 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 ACLYP53396 1101 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 TLE2Q04725 743 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 RUFY3Q7L099 469 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 ENAHQ8N8S7 591 aaPredicted RBP23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 TTC14Q96N46 770 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 SOWAHBA6NEL2 793 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 MOXD2PA6NHM9 499 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 CST5P28325 142 aaPredicted RBP23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 SEC23AQ15436 765 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 LRRC2Q9BYS8 371 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 UPF3AQ9H1J1 476 aaKnown RBP23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 GPCPD1Q9NPB8 672 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 CYP39A1Q9NYL5 469 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 CYP46A1Q9Y6A2 500 aa23.24■■□□□ 1.31
R3HCC1-210ENST00000625275 MYADML2A6NDP7 307 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 ASB14A6NK59 587 aa23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 IFIT3O14879 490 aaKnown RBP23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 C6orf222P0C671 652 aaPredicted RBP23.23■■□□□ 1.31
R3HCC1-210ENST00000625275 CCSAPQ6IQ19 270 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms