RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 MYO5BQ9ULV0 1848 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 A2ML1A8K2U0 1454 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 A0A087WZG4 1122 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 NOTOA8MTQ0 251 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-208ENST00000624953 PRAMEF1O95521 474 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 HPXP02790 462 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 RNF111Q6ZNA4 994 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 PI4K2BQ8TCG2 481 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 TCTN2Q96GX1 697 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF512BQ96KM6 892 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-208ENST00000624953 PRDM7Q9NQW5 492 aa4.95□□□□□ -1.62
CDKL5-208ENST00000624953 RGS17Q9UGC6 210 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-208ENST00000624953 SHANK2Q9UPX8 1470 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF205O95201 554 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 BMP8BP34820 402 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 RALGPS1Q5JS13 557 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 EFCAB2Q5VUJ9 269 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 RC3H2Q9HBD1 1191 aaKnown RBP4.94□□□□□ -1.62
CDKL5-208ENST00000624953 PRKAG3Q9UGI9 489 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 DUSP13Q9UII6 198 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 TMEM59LQ9UK28 342 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 FHOD1Q9Y613 1164 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 TIAM1Q13009 1591 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 MROH1Q8NDA8 1641 aa4.94□□□□□ -1.62
CDKL5-208ENST00000624953 LRRC7Q96NW7 1537 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 GPATCH8Q9UKJ3 1502 aaKnown RBP4.93□□□□□ -1.62
CDKL5-208ENST00000624953 ROBO1Q9Y6N7 1651 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 DNAJC25-GNG10A0A024R161 153 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 EFEMP2O95967 443 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF445P59923 1031 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 ZC3H6P61129 1189 aaKnown RBP4.93□□□□□ -1.62
CDKL5-208ENST00000624953 EGR3Q06889 387 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 FMN1Q68DA7 1419 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 SRCAPQ6ZRS2 3230 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 SHISA4Q96DD7 197 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 CAPN10Q9HC96 672 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 GP6Q9HCN6 339 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 CHST7Q9NS84 486 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF451Q9Y4E5 1061 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 PCDHB12Q9Y5F1 795 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 MED14O60244 1454 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 A2MP01023 1474 aa4.93□□□□□ -1.62
CDKL5-208ENST00000624953 EEA1Q15075 1411 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 KLF4O43474 513 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 CD247P20963 164 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 ETFBP38117 255 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF143P52747 638 aaPredicted RBP4.92□□□□□ -1.62
CDKL5-208ENST00000624953 ARID5AQ03989 594 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 RTP2Q5QGT7 225 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 DCAF15Q66K64 600 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 CREG2Q8IUH2 290 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 CCDC120Q96HB5 630 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 HAUS7Q99871 368 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 ADAMTS10Q9H324 1103 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF408Q9H9D4 720 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 GFOD1Q9NXC2 390 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 MINPP1Q9UNW1 487 aa4.92□□□□□ -1.62
CDKL5-208ENST00000624953 CLIP1P30622 1438 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF124Q15973 351 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 TNNI3KQ59H18 835 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF648Q5T619 568 aaPredicted RBP4.91□□□□□ -1.62
CDKL5-208ENST00000624953 FYB2Q5VWT5 728 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 TDRD10Q5VZ19 366 aaKnown RBP4.91□□□□□ -1.62
CDKL5-208ENST00000624953 ARHGEF39Q8N4T4 335 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 POU5F2Q8N7G0 328 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 PDZD8Q8NEN9 1154 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 RCC1LQ96I51 464 aaKnown RBP4.91□□□□□ -1.62
CDKL5-208ENST00000624953 CRBNQ96SW2 442 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 MKRN2Q9H000 416 aaKnown RBP4.91□□□□□ -1.62
CDKL5-208ENST00000624953 WHRNQ9P202 907 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 PZPP20742 1482 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 PHLPP1O60346 1717 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 KDM5DQ9BY66 1539 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 UGGT1Q9NYU2 1555 aa4.91□□□□□ -1.62
CDKL5-208ENST00000624953 CCDC18Q5T9S5 1454 aa4.9□□□□□ -1.62
CDKL5-208ENST00000624953 MBD5Q9P267 1494 aa4.9□□□□□ -1.62
CDKL5-208ENST00000624953 ZNF503-AS2A6NEH8 195 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 SMAD7O15105 426 aaKnown RBP4.9□□□□□ -1.63
CDKL5-208ENST00000624953 GSNP06396 782 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 VAV1P15498 845 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 SLC7A5Q01650 507 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 GNL2Q13823 731 aaKnown RBP4.9□□□□□ -1.63
CDKL5-208ENST00000624953 NAALADL2Q58DX5 795 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 FBXW10Q5XX13 1052 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 MRM1Q6IN84 353 aaKnown RBP4.9□□□□□ -1.63
CDKL5-208ENST00000624953 VPS37DQ86XT2 251 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 CCDC144CPQ8IYA2 1237 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 TMEM52Q8NDY8 209 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 ASIC4Q96FT7 647 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 SLC12A9Q9BXP2 914 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 FOXP3Q9BZS1 431 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.9□□□□□ -1.63
CDKL5-208ENST00000624953 SLAMF8Q9P0V8 285 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 TCFL5Q9UL49 500 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 MAP3K1Q13233 1512 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 CHD2O14647 1828 aaKnown RBP4.9□□□□□ -1.63
CDKL5-208ENST00000624953 PIK3C2BO00750 1634 aa4.9□□□□□ -1.63
CDKL5-208ENST00000624953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.9□□□□□ -1.63
CDKL5-208ENST00000624953 CASKIN1Q8WXD9 1431 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms