RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
SND1-IT1-201ENST00000623342 FRMPD2Q68DX3 1309 aaPredicted RBP9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 F8W031 263 aaPredicted RBP9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 PSMA7O14818 248 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 SNHG28P0DPA3 235 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 AKR1B1P15121 316 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 EEF1GP26641 437 aaKnown RBP9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 JAKMIP3Q5VZ66 844 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 CREBRFQ8IUR6 639 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 LRRC15Q8TF66 581 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 THAP9Q9H5L6 903 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 MRPL44Q9H9J2 332 aaKnown RBP9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
SND1-IT1-201ENST00000623342 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 KCNA4P22459 653 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TECP42680 631 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 MAP3K9P80192 1104 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 UBXN1Q04323 297 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 DPP8Q6V1X1 898 aaPredicted RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 IRF2BP1Q8IU81 584 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TMTC1Q8IUR5 882 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 LRRC47Q8N1G4 583 aaKnown RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 CERS5Q8N5B7 392 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 NOC3LQ8WTT2 800 aaKnown RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 CNKSR2Q8WXI2 1034 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 UBXN4Q92575 508 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 DHTKD1Q96HY7 919 aaPredicted RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 NUP88Q99567 741 aaPredicted RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 C7orf25Q9BPX7 421 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 GTPBP4Q9BZE4 634 aaKnown RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 DDX4Q9NQI0 724 aaKnown RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 SERPINB13Q9UIV8 391 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 MYO3BQ8WXR4 1341 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 EFCAB8A8MWE9 144 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TTLL1O95922 423 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 NPR1P16066 1061 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 H2AFXP16104 143 aaPredicted RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 ADCY7P51828 1080 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 AMPD3Q01432 767 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 ARHGAP29Q52LW3 1261 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 CALML4Q96GE6 196 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 CARD6Q9BX69 1037 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TRIM9Q9C026 710 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 RGS17Q9UGC6 210 aaPredicted RBP9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 C10orf71Q711Q0 1435 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 ANKRD31Q8N7Z5 1873 aa9.34□□□□□ -0.91
SND1-IT1-201ENST00000623342 TADA3O75528 432 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 SRGNP10124 158 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 PPP1R2P41236 205 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 EIF6P56537 245 aaKnown RBP9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 PPP1R18Q6NYC8 613 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 CYP26C1Q6V0L0 522 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 COA7Q96BR5 231 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 LZTFL1Q9NQ48 299 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 EXOC1Q9NV70 894 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 MAGEC2Q9UBF1 373 aaPredicted RBP9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 MRFAP1Q9Y605 127 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 A0A1W2PQC6 194 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 BICDL2A1A5D9 508 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 LGALS16A8MUM7 142 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 KIF5CO60282 957 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 TXKP42681 527 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 PDE4DQ08499 809 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZNF543Q08ER8 600 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 CALCRLQ16602 461 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 DOK7Q18PE1 504 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 HHIPL2Q6UWX4 724 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 NLGN1Q8N2Q7 840 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 MTMR9Q96QG7 549 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 MMTAG2Q9BU76 263 aaKnown RBP9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 PDGFDQ9GZP0 370 aaPredicted RBP9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 GPCPD1Q9NPB8 672 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 MYH8P13535 1937 aa9.33□□□□□ -0.92
SND1-IT1-201ENST00000623342 PNMA6FA0A0J9YX94 578 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 RNF225M0QZC1 329 aaPredicted RBP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 HLA-DOAP06340 250 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 CCNE1P24864 410 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 SHMT1P34896 483 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 KRT9P35527 623 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 FXR2P51116 673 aaKnown RBP eCLIP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 ERVK-24P63145 666 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 ASIC1P78348 528 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 TMEM266Q2M3C6 531 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 MSL1Q68DK7 614 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 CDC42EP5Q6NZY7 148 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 CLEC10AQ8IUN9 316 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 P2RX5Q93086 422 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms