RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 KRT40Q6A162 431 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 BRAPQ7Z569 592 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 CPXCR1Q8N123 301 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 CHST13Q8NET6 341 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 ZMYND12Q9H0C1 365 aa12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
SNORD3D-201ENST00000619178 hCG_1642624A0A1W2PR95 340 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 STXBP3O00186 592 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 ALAS1P13196 640 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 MPHOSPH6Q99547 160 aaKnown RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 P2RX7Q99572 595 aaKnown RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 MROH8Q9H579 483 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 VPS54Q9P1Q0 977 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 PCDHA4Q9UN74 947 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
SNORD3D-201ENST00000619178 PFASO15067 1338 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 B4DLN1 442 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 PPFIA3O75145 1194 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 ZSCAN22P10073 491 aaPredicted RBP12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 HSPA6P17066 643 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 GPRC5AQ8NFJ5 357 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 COA7Q96BR5 231 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 PAGR1Q9BTK6 254 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 RAVER2Q9HCJ3 691 aaKnown RBP12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
SNORD3D-201ENST00000619178 LCTP09848 1927 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 LOXHD1Q8IVV2 1947 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 MCM3APO60318 1980 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 SPDYE3A6NKU9 549 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 C1QTNF8P60827 252 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 RNF146Q9NTX7 359 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 MORF4L1Q9UBU8 362 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 WDR81Q562E7 1941 aa12.64□□□□□ -0.39
SNORD3D-201ENST00000619178 ZNF536O15090 1300 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 CA12O43570 354 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 STRNO43815 780 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 TLR2O60603 784 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 BRD1O95696 1058 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 F13A1P00488 732 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 MAPK4P31152 587 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 FOSBP53539 338 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 ERVK-9P63128 1117 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 ERVK-24P63145 666 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 TMEM132BQ14DG7 1078 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 SLC35G1Q2M3R5 365 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 REPS2Q8NFH8 660 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 ZNF396Q96N95 335 aaPredicted RBP12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
SNORD3D-201ENST00000619178 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 CFBP00751 764 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 CYP2C8P10632 490 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 DDIT3P35638 169 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 SNAP25P60880 206 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 GUCY1B3Q02153 619 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 KCTD2Q14681 263 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 KIF22Q14807 665 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 RILPL1Q5EBL4 403 aa12.62□□□□□ -0.39
SNORD3D-201ENST00000619178 RNF207Q6ZRF8 634 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms