RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 GTF3C2Q8WUA4 911 aaPredicted RBP13.43□□□□□ -0.26
PDPN-211ENST00000617617 NAP1L4Q99733 375 aaKnown RBP13.43□□□□□ -0.26
PDPN-211ENST00000617617 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 A0A1W2PQ27 194 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 A0A1W2PQ64 194 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 A0A1W2PQD8 194 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 RAD21O60216 631 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
PDPN-211ENST00000617617 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 WNK4Q96J92 1243 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 FRMPD4Q14CM0 1322 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 LRRC37A2A6NM11 1700 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 ZNF236Q9UL36 1845 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
PDPN-211ENST00000617617 LAD1O00515 517 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 MEIS2O14770 477 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 ZBED4O75132 1171 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 GJA5P36382 358 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 IKQ13123 557 aaPredicted RBP13.42□□□□□ -0.26
PDPN-211ENST00000617617 PABPC4Q13310 644 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDPN-211ENST00000617617 SNAPC2Q13487 334 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 PRKG1Q13976 671 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
PDPN-211ENST00000617617 CST9Q5W186 159 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 MOB2Q70IA6 237 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 HHIPL1Q96JK4 782 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 FAM237AA0A1B0GTK4 181 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 KIF3CO14782 793 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
PDPN-211ENST00000617617 FLOT1O75955 427 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDPN-211ENST00000617617 SLC10A4Q96EP9 437 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 CLIC4Q9Y696 253 aa13.42□□□□□ -0.26
PDPN-211ENST00000617617 CCDC194A0A1B0GVG4 234 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 CELF2O95319 508 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 HSD17B4P51659 736 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 GPAT2Q6NUI2 795 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 GTF2A2P52657 109 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 ADALQ6DHV7 355 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
PDPN-211ENST00000617617 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
PDPN-211ENST00000617617 CYP3A7-CYP3A51PA0A087WV96 503 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
PDPN-211ENST00000617617 SPTLC2O15270 562 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 FIBPO43427 364 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 CYP3A7P24462 503 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 USP11P51784 963 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 DGKZQ13574 1117 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 TTC38Q5R3I4 469 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 MCF2L2Q86YR7 1114 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 ZNF214Q9UL59 606 aaPredicted RBP13.4□□□□□ -0.26
PDPN-211ENST00000617617 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 CYP3A4P08684 503 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 CETPP11597 493 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 COPB2P35606 906 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 PRPHP41219 470 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
PDPN-211ENST00000617617 PIK3AP1Q6ZUJ8 805 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 ANKRD23Q86SG2 305 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 C4orf32Q8N8J7 132 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 PGBD1Q96JS3 809 aa13.4□□□□□ -0.26
PDPN-211ENST00000617617 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.27
PDPN-211ENST00000617617 TREML2Q5T2D2 321 aa13.4□□□□□ -0.27
PDPN-211ENST00000617617 SPRYD7Q5W111 196 aa13.4□□□□□ -0.27
PDPN-211ENST00000617617 NEK8Q86SG6 692 aa13.4□□□□□ -0.27
PDPN-211ENST00000617617 FERMT2Q96AC1 680 aa13.4□□□□□ -0.27
PDPN-211ENST00000617617 ISY1Q9ULR0 285 aaKnown RBP13.4□□□□□ -0.27
PDPN-211ENST00000617617 PCDHB6Q9Y5E3 794 aa13.4□□□□□ -0.27
PDPN-211ENST00000617617 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 RPTORQ8N122 1335 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 TRAK2O60296 914 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 CUTAO60888 179 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 NCLP19338 710 aaKnown RBP13.39□□□□□ -0.27
PDPN-211ENST00000617617 STK38Q15208 465 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
PDPN-211ENST00000617617 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 CCPG1Q9ULG6 757 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms