RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 KARSQ15046 597 aaKnown RBP18.54■□□□□ 0.56
CNOT3-208ENST00000613073 NT5DC1Q5TFE4 455 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 CCDC148Q8NFR7 591 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 MTMR4Q9NYA4 1195 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 EIF3CLB5ME19 914 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 M0R2N6 131 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 MPHOSPH10O00566 681 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 CRKP46108 304 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 UBASH3AP57075 661 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 ATP2B2Q01814 1243 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 MORC3Q14149 939 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 LZTS2Q9BRK4 669 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 SPZ1Q9BXG8 430 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 GEMIN8Q9NWZ8 242 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 PUF60Q9UHX1 559 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 FAN1Q9Y2M0 1017 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 PPP2R2CQ9Y2T4 447 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 RRP36Q96EU6 259 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 YY1AP1Q9H869 796 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 FAM196BA6NMK8 535 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 CCP110O43303 1012 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 PDHBP11177 359 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 EN1Q05925 392 aaPredicted RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 EZH2Q15910 746 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 DESI2Q9BSY9 194 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 IRX2Q9BZI1 471 aaPredicted RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 BLZF1Q9H2G9 400 aa18.53■□□□□ 0.56
CNOT3-208ENST00000613073 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
CNOT3-208ENST00000613073 SMCO2A6NFE2 343 aa18.52■□□□□ 0.56
CNOT3-208ENST00000613073 TUBB4AP04350 444 aa18.52■□□□□ 0.56
CNOT3-208ENST00000613073 PODNQ7Z5L7 613 aa18.52■□□□□ 0.56
CNOT3-208ENST00000613073 C4orf32Q8N8J7 132 aa18.52■□□□□ 0.56
CNOT3-208ENST00000613073 TMEM60Q9H2L4 133 aa18.52■□□□□ 0.56
CNOT3-208ENST00000613073 GPCPD1Q9NPB8 672 aa18.52■□□□□ 0.56
CNOT3-208ENST00000613073 KCNJ6P48051 423 aa18.52■□□□□ 0.55
CNOT3-208ENST00000613073 KLHL10Q6JEL2 608 aa18.52■□□□□ 0.55
CNOT3-208ENST00000613073 SMYD4Q8IYR2 804 aaPredicted RBP18.52■□□□□ 0.55
CNOT3-208ENST00000613073 MRFAP1Q9Y605 127 aa18.52■□□□□ 0.55
CNOT3-208ENST00000613073 ECE2O60344 883 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 MAP3K9P80192 1104 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 HHIPL2Q6UWX4 724 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 MLKLQ8NB16 471 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 NFE2L3Q9Y4A8 694 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 UTRNP46939 3433 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 PP2D1A8MPX8 630 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 SHMT1P34896 483 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 AOC3Q16853 763 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 RSRC2Q7L4I2 434 aaKnown RBP18.51■□□□□ 0.55
CNOT3-208ENST00000613073 SPATA20Q8TB22 786 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
CNOT3-208ENST00000613073 ZSCAN12O43309 604 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 RAD21O60216 631 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 GUCY2CP25092 1073 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 TOGARAM2Q6ZUX3 1019 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 SH3RF1Q7Z6J0 888 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 CCDC12Q8WUD4 166 aaPredicted RBP18.5■□□□□ 0.55
CNOT3-208ENST00000613073 MED15Q96RN5 788 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 PSD3Q9NYI0 1048 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 MAGEA9P43362 315 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
CNOT3-208ENST00000613073 IQUBQ8NA54 791 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
CNOT3-208ENST00000613073 TFRCP02786 760 aaKnown RBP18.49■□□□□ 0.55
CNOT3-208ENST00000613073 HLA-DOAP06340 250 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 IVLP07476 585 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 NOVP48745 357 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 STX17P56962 302 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 DPYDQ12882 1025 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 LETM2Q2VYF4 491 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 ZSCAN29Q8IWY8 852 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-208ENST00000613073 DAGLBQ8NCG7 672 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 RABGGTAQ92696 567 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 COA7Q96BR5 231 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 PLIN2Q99541 437 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 PDGFDQ9GZP0 370 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-208ENST00000613073 BIN2Q9UBW5 565 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-208ENST00000613073 TTLL1O95922 423 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 SLC15A2Q16348 729 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 JAKMIP3Q5VZ66 844 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 GALNT17Q6IS24 598 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 TRIML1Q8N9V2 468 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 SAMSN1Q9NSI8 373 aaKnown RBP18.49■□□□□ 0.55
CNOT3-208ENST00000613073 DACH1Q9UI36 760 aa18.49■□□□□ 0.55
CNOT3-208ENST00000613073 COBLO75128 1261 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 CD44P16070 742 aaKnown RBP18.48■□□□□ 0.55
CNOT3-208ENST00000613073 TXLNAP40222 546 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 DACT2Q5SW24 774 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 ARL6IP4Q66PJ3 421 aaKnown RBP18.48■□□□□ 0.55
CNOT3-208ENST00000613073 STYK1Q6J9G0 422 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 RASSF8Q8NHQ8 419 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 MTRQ99707 1265 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 C6orf50Q9HD87 102 aa18.48■□□□□ 0.55
CNOT3-208ENST00000613073 CCNT1O60563 726 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms