RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MCMDC2Q4G0Z9 681 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 TAPT1Q6NXT6 567 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 FAM126BQ8IXS8 530 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 SLC43A3Q8NBI5 491 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 MORC4Q8TE76 937 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 DCAF4Q8WV16 495 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 RANBP17Q9H2T7 1088 aaKnown RBP21.28■■□□□ 1
CHMP2A-208ENST00000601220 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 CDH23Q9H251 3354 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 MROH7Q68CQ1 1323 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 A0A0U1RQG5 324 aaPredicted RBP21.27■■□□□ 1
CHMP2A-208ENST00000601220 ICAM1P05362 532 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 HSPD1P10809 573 aaKnown RBP21.27■■□□□ 1
CHMP2A-208ENST00000601220 SMPD1P17405 629 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 BEX3Q00994 111 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 TMEM63BQ5T3F8 832 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 MFSD5Q6N075 450 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 ZNF589Q86UQ0 364 aaPredicted RBP21.27■■□□□ 1
CHMP2A-208ENST00000601220 PURBQ96QR8 312 aaKnown RBP21.27■■□□□ 1
CHMP2A-208ENST00000601220 TMEM47Q9BQJ4 181 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 PDGFCQ9NRA1 345 aa21.27■■□□□ 1
CHMP2A-208ENST00000601220 UNC80Q8N2C7 3258 aa21.26■□□□□ 0.99
CHMP2A-208ENST00000601220 CD4P01730 458 aa21.26■□□□□ 0.99
CHMP2A-208ENST00000601220 CCPG1Q9ULG6 757 aa21.26■□□□□ 0.99
CHMP2A-208ENST00000601220 GRIN2DO15399 1336 aa21.26■□□□□ 0.99
CHMP2A-208ENST00000601220 ZMYM6O95789 1325 aa21.26■□□□□ 0.99
CHMP2A-208ENST00000601220 TOP1P11387 765 aaKnown RBP21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 SLC16A2P36021 539 aa21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 NMIQ13287 307 aaPredicted RBP21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 RASIP1Q5U651 963 aa21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.25■□□□□ 0.991e-9■■□□□ 11.7
CHMP2A-208ENST00000601220 ZBTB47Q9UFB7 747 aaPredicted RBP21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 MTMR7Q9Y216 660 aa21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 MCM3APO60318 1980 aa21.25■□□□□ 0.99
CHMP2A-208ENST00000601220 TMEM265A0A087WTH1 108 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 CCDC96Q2M329 555 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 TMEM240Q5SV17 173 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 IQSEC1Q6DN90 963 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 CXCL17Q6UXB2 119 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 TLK2Q86UE8 772 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 MYLIPQ8WY64 445 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 CUL9Q8IWT3 2517 aa21.24■□□□□ 0.99
CHMP2A-208ENST00000601220 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 FSCN1Q16658 493 aaKnown RBP21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 SYDE2Q5VT97 1194 aa21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 NSMFQ6X4W1 530 aa21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 FBXO16Q8IX29 292 aaPredicted RBP21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 SMC5Q8IY18 1101 aa21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 COL25A1Q9BXS0 654 aaPredicted RBP21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 Q9Y3F1 56 aa21.23■□□□□ 0.99
CHMP2A-208ENST00000601220 NFIBO00712 420 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 DYNC1LI2O43237 492 aaPredicted RBP21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 CABYRO75952 493 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 SNHG28P0DPA3 235 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 PDHBP11177 359 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 CSF2RAP15509 400 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 PPIGQ13427 754 aaKnown RBP eCLIP21.22■□□□□ 0.991e-6■■■□□ 17.4
CHMP2A-208ENST00000601220 BAATQ14032 418 aaPredicted RBP21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 RRP12Q5JTH9 1297 aaKnown RBP21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 NOL8Q76FK4 1167 aaKnown RBP21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 EEPD1Q7L9B9 569 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 TBC1D10CQ8IV04 446 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 CLEC4DQ8WXI8 215 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 GPCPD1Q9NPB8 672 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 FRMPD2Q68DX3 1309 aaPredicted RBP21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 CCDC171Q6TFL3 1326 aa21.22■□□□□ 0.99
CHMP2A-208ENST00000601220 HAND2P61296 217 aa21.21■□□□□ 0.99
CHMP2A-208ENST00000601220 MAFAQ8NHW3 353 aaPredicted RBP21.21■□□□□ 0.99
CHMP2A-208ENST00000601220 TTC14Q96N46 770 aa21.21■□□□□ 0.99
CHMP2A-208ENST00000601220 VTA1Q9NP79 307 aa21.21■□□□□ 0.99
CHMP2A-208ENST00000601220 TOMM22Q9NS69 142 aa21.21■□□□□ 0.99
CHMP2A-208ENST00000601220 RBM47A0AV96 593 aaKnown RBP21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 CYP2C18P33260 490 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 ITGA7Q13683 1181 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 GRIN2CQ14957 1233 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 AKNAD1Q5T1N1 836 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 TMEM199Q8N511 208 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 PPP1R12CQ9BZL4 782 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 AP5M1Q9H0R1 490 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 LRRC37A2A6NM11 1700 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
CHMP2A-208ENST00000601220 LOC102724159A0A0B4J2E5 919 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 TLR3O15455 904 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 ACRP10323 421 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 PCP11498 1178 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 SDSP20132 328 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 DNAJB2P25686 324 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 ALDH5A1P51649 535 aaPredicted RBP21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 ZNF543Q08ER8 600 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 AAMPQ13685 434 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 PWP2Q15269 919 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 DUSP28Q4G0W2 176 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 KIAA1211Q6ZU35 1233 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 ZNF365Q70YC5 407 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 PLEKHM2Q8IWE5 1019 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 OSBPL3Q9H4L5 887 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms