RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 C7orf25Q9BPX7 421 aa14.8□□□□□ -0.04
VRK3-209ENST00000594948 MAPK8IP1Q9UQF2 711 aa14.8□□□□□ -0.04
VRK3-209ENST00000594948 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
VRK3-209ENST00000594948 ABCB11O95342 1321 aa14.8□□□□□ -0.04
VRK3-209ENST00000594948 RASSF10A6NK89 507 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 B4DLN1 442 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 TRIM21P19474 475 aaKnown RBP14.79□□□□□ -0.04
VRK3-209ENST00000594948 TBC1D8BQ0IIM8 1120 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 KIF5AQ12840 1032 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 ORC2Q13416 577 aaPredicted RBP14.79□□□□□ -0.04
VRK3-209ENST00000594948 FBXO33Q7Z6M2 555 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 TRIM58Q8NG06 486 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 SECISBP2LQ93073 1101 aaKnown RBP14.79□□□□□ -0.04
VRK3-209ENST00000594948 FAM84BQ96KN1 310 aaPredicted RBP14.79□□□□□ -0.04
VRK3-209ENST00000594948 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 FAM107BQ9H098 131 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 KAT14Q9H8E8 782 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 PCDHA6Q9UN73 950 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 PCDHA8Q9Y5H6 950 aa14.79□□□□□ -0.04
VRK3-209ENST00000594948 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 FLT1P17948 1338 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 NUTM2BA6NNL0 878 aaPredicted RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 NUTM2EB1AL46 878 aaPredicted RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 ADAMTS3O15072 1205 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 USO1O60763 962 aaKnown RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 CLSTN1O94985 981 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 LCA5LO95447 670 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 CORO7P57737 925 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 CAGE1Q8TC20 777 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 AENQ8WTP8 325 aaKnown RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 SELENOOQ9BVL4 669 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 BTG4Q9NY30 223 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 FAM184BQ9ULE4 1060 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 SNX12Q9UMY4 172 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 ATAD5Q96QE3 1844 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 RGL2O15211 777 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 IDEP14735 1019 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 FKBP15Q5T1M5 1219 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 CCDC155Q8N6L0 562 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 RASSF8Q8NHQ8 419 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 SMARCC1Q92922 1105 aaPredicted RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 CNOT6LQ96LI5 555 aaKnown RBP14.78□□□□□ -0.04
VRK3-209ENST00000594948 LZTS2Q9BRK4 669 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 LACRTQ9GZZ8 138 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 TCP11L1Q9NUJ3 509 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 AGPAT5Q9NUQ2 364 aa14.78□□□□□ -0.04
VRK3-209ENST00000594948 MYH10P35580 1976 aa14.77□□□□□ -0.04
VRK3-209ENST00000594948 RCCD1A6NED2 376 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 TRIM66O15016 1216 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 NMT2O60551 498 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 PHACTR2O75167 634 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 TACC1O75410 805 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 VEGFAP15692 232 aaPredicted RBP14.77□□□□□ -0.05
VRK3-209ENST00000594948 TNFRSF8P28908 595 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 AMPD3Q01432 767 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 MECOMQ03112 1051 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 SPA17Q15506 151 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 FAM47AQ5JRC9 791 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 MIIPQ5JXC2 388 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 ARHGAP27Q6ZUM4 889 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 TMEM60Q9H2L4 133 aa14.77□□□□□ -0.05
VRK3-209ENST00000594948 PES1O00541 588 aaKnown RBP14.76□□□□□ -0.05
VRK3-209ENST00000594948 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 TCP1P17987 556 aaKnown RBP14.76□□□□□ -0.05
VRK3-209ENST00000594948 MTIF2P46199 727 aaKnown RBP14.76□□□□□ -0.05
VRK3-209ENST00000594948 ANKRD40Q6AI12 368 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 CNNM4Q6P4Q7 775 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 FOXR2Q6PJQ5 311 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 GBP6Q6ZN66 633 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 CABP7Q86V35 215 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 PNMA1Q8ND90 353 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 CAPZA3Q96KX2 299 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 NOC4LQ9BVI4 516 aaKnown RBP14.76□□□□□ -0.05
VRK3-209ENST00000594948 EDEM3Q9BZQ6 932 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 TRIM9Q9C026 710 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 SH2D4AQ9H788 454 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 BARHL2Q9NY43 387 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 RSPH14Q9UHP6 348 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 MINPP1Q9UNW1 487 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 PLAGL2Q9UPG8 496 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 COL16A1Q07092 1604 aaPredicted RBP14.76□□□□□ -0.05
VRK3-209ENST00000594948 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 A6NNZ2 444 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 GOLGA8KD6RF30 607 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 AGPSO00116 658 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 STXBP3O00186 592 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 PDE2AO00408 941 aaPredicted RBP14.76□□□□□ -0.05
VRK3-209ENST00000594948 CPP00450 1065 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 PDE4DQ08499 809 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 KRT25Q7Z3Z0 450 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 CREG2Q8IUH2 290 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 FAM76AQ8TAV0 307 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 PPM1EQ8WY54 764 aa14.76□□□□□ -0.05
VRK3-209ENST00000594948 CCDC42Q96M95 316 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms