RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 PLA2G6O60733 806 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 CD4P01730 458 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 ALAS1P13196 640 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 SMPD1P17405 629 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 TMEM240Q5SV17 173 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 RCSD1Q6JBY9 416 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
USE1-203ENST00000593597 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 FBXO16Q8IX29 292 aaPredicted RBP12.65□□□□□ -0.38
USE1-203ENST00000593597 SLC43A3Q8NBI5 491 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 MAFAQ8NHW3 353 aaPredicted RBP12.65□□□□□ -0.38
USE1-203ENST00000593597 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 VWCEQ96DN2 955 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
USE1-203ENST00000593597 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
USE1-203ENST00000593597 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 GRXCR1A8MXD5 290 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 DCDC2CA8MYV0 355 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 ORC4O43929 436 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 CSF2RAP15509 400 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 DNAJB2P25686 324 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 SLC16A2P36021 539 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 PBX2P40425 430 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 PDE1AP54750 535 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 GRIN2CQ14957 1233 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 GNASQ5JWF2 1037 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 MFSD5Q6N075 450 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 CXCL17Q6UXB2 119 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 USP38Q8NB14 1042 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 GLT1D1Q96MS3 346 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 RANBP17Q9H2T7 1088 aaKnown RBP12.64□□□□□ -0.39
USE1-203ENST00000593597 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
USE1-203ENST00000593597 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
USE1-203ENST00000593597 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
USE1-203ENST00000593597 KIAA1217Q5T5P2 1943 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 NFIBO00712 420 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 FDX1P10109 184 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 ACRP10323 421 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 TNFAIP2Q03169 654 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 ALX1Q15699 326 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
USE1-203ENST00000593597 TKFCQ3LXA3 575 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 TLK2Q86UE8 772 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
USE1-203ENST00000593597 MORC4Q8TE76 937 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 CHURC1Q8WUH1 139 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
USE1-203ENST00000593597 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
USE1-203ENST00000593597 TMEM265A0A087WTH1 108 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 RBAK-RBAKDNI3L0D1 243 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 RANBP6O60518 1105 aaKnown RBP12.62□□□□□ -0.39
USE1-203ENST00000593597 FGAP02671 866 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 ICAM1P05362 532 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 SLC3A2P08195 630 aaKnown RBP12.62□□□□□ -0.39
USE1-203ENST00000593597 CYP2C18P33260 490 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 IKQ13123 557 aaPredicted RBP12.62□□□□□ -0.39
USE1-203ENST00000593597 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
USE1-203ENST00000593597 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 TBC1D10CQ8IV04 446 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 TMEM47Q9BQJ4 181 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
USE1-203ENST00000593597 CCPG1Q9ULG6 757 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
USE1-203ENST00000593597 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 ASB14A6NK59 587 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
USE1-203ENST00000593597 PDHBP11177 359 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 FOSL2P15408 326 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 PSMC6P62333 389 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 HDAC1Q13547 482 aaPredicted RBP12.61□□□□□ -0.39
USE1-203ENST00000593597 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
USE1-203ENST00000593597 CCDC96Q2M329 555 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 DCAF4Q8WV16 495 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 CLEC4DQ8WXI8 215 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 PBX4Q9BYU1 374 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 WNT8AQ9H1J5 351 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 NEDD4P46934 1319 aa12.61□□□□□ -0.39
USE1-203ENST00000593597 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 DYNC1LI2O43237 492 aaPredicted RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 B4GALT4O60513 344 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 ALDH5A1P51649 535 aaPredicted RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 HAND2P61296 217 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.398e-6■■■■□ 22.7
USE1-203ENST00000593597 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
USE1-203ENST00000593597 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
USE1-203ENST00000593597 SYDE2Q5VT97 1194 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms