RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CSF2RAP15509 400 aa19.38■□□□□ 0.69
LIG1-205ENST00000593425 PPIGQ13427 754 aaKnown RBP eCLIP19.38■□□□□ 0.694e-7■■■□□ 14.8
LIG1-205ENST00000593425 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
LIG1-205ENST00000593425 TMEM240Q5SV17 173 aa19.38■□□□□ 0.69
LIG1-205ENST00000593425 RCSD1Q6JBY9 416 aa19.38■□□□□ 0.69
LIG1-205ENST00000593425 TLK2Q86UE8 772 aa19.38■□□□□ 0.69
LIG1-205ENST00000593425 MTMR7Q9Y216 660 aa19.38■□□□□ 0.69
LIG1-205ENST00000593425 ASB14A6NK59 587 aa19.37■□□□□ 0.69
LIG1-205ENST00000593425 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
LIG1-205ENST00000593425 TMEM63BQ5T3F8 832 aa19.37■□□□□ 0.69
LIG1-205ENST00000593425 CXCL17Q6UXB2 119 aa19.37■□□□□ 0.69
LIG1-205ENST00000593425 NOL8Q76FK4 1167 aaKnown RBP19.37■□□□□ 0.69
LIG1-205ENST00000593425 PURBQ96QR8 312 aaKnown RBP19.37■□□□□ 0.69
LIG1-205ENST00000593425 PDGFCQ9NRA1 345 aa19.37■□□□□ 0.69
LIG1-205ENST00000593425 GBF1Q92538 1859 aa19.37■□□□□ 0.69
LIG1-205ENST00000593425 GRXCR1A8MXD5 290 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 TLR3O15455 904 aaKnown RBP19.36■□□□□ 0.69
LIG1-205ENST00000593425 RANBP6O60518 1105 aaKnown RBP19.36■□□□□ 0.69
LIG1-205ENST00000593425 CD4P01730 458 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 ACRP10323 421 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 SMPD1P17405 629 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 PBX2P40425 430 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 NOVP48745 357 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 RASIP1Q5U651 963 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 EEPD1Q7L9B9 569 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 FBXO16Q8IX29 292 aaPredicted RBP19.36■□□□□ 0.69
LIG1-205ENST00000593425 CYP39A1Q9NYL5 469 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 ANAPC4Q9UJX5 808 aa19.36■□□□□ 0.69
LIG1-205ENST00000593425 CYP2C18P33260 490 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 FSCN1Q16658 493 aaKnown RBP19.35■□□□□ 0.69
LIG1-205ENST00000593425 CCDC96Q2M329 555 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 TTBK2Q6IQ55 1244 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 TAPT1Q6NXT6 567 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 NSMFQ6X4W1 530 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 ZNF365Q70YC5 407 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 TMEM199Q8N511 208 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 SLC43A3Q8NBI5 491 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 TIFAQ96CG3 184 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 PBX4Q9BYU1 374 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 ZNF576Q9H609 170 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 CCPG1Q9ULG6 757 aa19.35■□□□□ 0.69
LIG1-205ENST00000593425 GRIN2DO15399 1336 aa19.34■□□□□ 0.69
LIG1-205ENST00000593425 UMODL1Q5DID0 1318 aa19.34■□□□□ 0.69
LIG1-205ENST00000593425 DYNC1LI2O43237 492 aaPredicted RBP19.34■□□□□ 0.69
LIG1-205ENST00000593425 USP38Q8NB14 1042 aa19.34■□□□□ 0.69
LIG1-205ENST00000593425 EVI5LQ96CN4 794 aa19.34■□□□□ 0.69
LIG1-205ENST00000593425 RANBP17Q9H2T7 1088 aaKnown RBP19.34■□□□□ 0.69
LIG1-205ENST00000593425 CUL9Q8IWT3 2517 aa19.33■□□□□ 0.69
LIG1-205ENST00000593425 ORC4O43929 436 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 ICAM1P05362 532 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 FGRP09769 529 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 SLC16A2P36021 539 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 ITGA7Q13683 1181 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 ANKRD45Q5TZF3 282 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 PSRC1Q6PGN9 363 aaPredicted RBP19.33■□□□□ 0.68
LIG1-205ENST00000593425 DCAF4Q8WV16 495 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 FAM227BQ96M60 508 aa19.33■□□□□ 0.68
LIG1-205ENST00000593425 A0A0D9SFI3 127 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 CABYRO75952 493 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 PSMC6P62333 389 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 ALX1Q15699 326 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 RRP12Q5JTH9 1297 aaKnown RBP19.32■□□□□ 0.68
LIG1-205ENST00000593425 BTNL9Q6UXG8 535 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 MORC4Q8TE76 937 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 HIPK3Q9H422 1215 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 IL23AQ9NPF7 189 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 HELLSQ9NRZ9 838 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 TOMM22Q9NS69 142 aa19.32■□□□□ 0.68
LIG1-205ENST00000593425 FRMPD2Q68DX3 1309 aaPredicted RBP19.31■□□□□ 0.68
LIG1-205ENST00000593425 NFIBO00712 420 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 PDE1AP54750 535 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 RRP1P56182 461 aaKnown RBP19.31■□□□□ 0.68
LIG1-205ENST00000593425 BAATQ14032 418 aaPredicted RBP19.31■□□□□ 0.68
LIG1-205ENST00000593425 SYDE2Q5VT97 1194 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 IQSEC1Q6DN90 963 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 KIAA1211Q6ZU35 1233 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 TMEM47Q9BQJ4 181 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 VTA1Q9NP79 307 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 CXXC1Q9P0U4 656 aaPredicted RBP19.31■□□□□ 0.68
LIG1-205ENST00000593425 PRUNE2Q8WUY3 3088 aa19.31■□□□□ 0.68
LIG1-205ENST00000593425 VCANP13611 3396 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 B4GALT4O60513 344 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 FGAP02671 866 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 ALDH5A1P51649 535 aaPredicted RBP19.3■□□□□ 0.68
LIG1-205ENST00000593425 HERVK_113Q902F9 699 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 TRPV6Q9H1D0 765 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 WNT8AQ9H1J5 351 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 GPCPD1Q9NPB8 672 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 Q9Y3F1 56 aa19.3■□□□□ 0.68
LIG1-205ENST00000593425 ZEB2O60315 1214 aa19.29■□□□□ 0.68
LIG1-205ENST00000593425 TOP1P11387 765 aaKnown RBP19.29■□□□□ 0.68
LIG1-205ENST00000593425 CCL23P55773 120 aa19.29■□□□□ 0.68
LIG1-205ENST00000593425 SLC30A10Q6XR72 485 aa19.29■□□□□ 0.68
LIG1-205ENST00000593425 ZNF589Q86UQ0 364 aaPredicted RBP19.29■□□□□ 0.68
LIG1-205ENST00000593425 NOC4LQ9BVI4 516 aaKnown RBP19.29■□□□□ 0.68
LIG1-205ENST00000593425 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
LIG1-205ENST00000593425 HSPD1P10809 573 aaKnown RBP19.28■□□□□ 0.68
LIG1-205ENST00000593425 PDHBP11177 359 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms