RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SLC16A2P36021 539 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 USP14P54578 494 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 PPIL2Q13356 520 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 SNAPC2Q13487 334 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 NPY5RQ15761 445 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 SKOR2Q2VWA4 1001 aaPredicted RBP15.46■□□□□ 0.07
VMP1-217ENST00000593168 KIAA1755Q5JYT7 1200 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 HEATR3Q7Z4Q2 680 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
VMP1-217ENST00000593168 NOSTRINQ8IVI9 506 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 CHURC1Q8WUH1 139 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 NUP88Q99567 741 aaPredicted RBP15.46■□□□□ 0.07
VMP1-217ENST00000593168 FEZ1Q99689 392 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 ISY1Q9ULR0 285 aaKnown RBP15.46■□□□□ 0.07
VMP1-217ENST00000593168 MGAMO43451 1857 aa15.46■□□□□ 0.06
VMP1-217ENST00000593168 ELP1O95163 1332 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 C19orf81C9J6K1 198 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 ZBTB5O15062 677 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 WDR46O15213 610 aaKnown RBP15.45■□□□□ 0.06
VMP1-217ENST00000593168 GNRH1P01148 92 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 SYDE2Q5VT97 1194 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 C17orf99Q6UX52 265 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 FAM160B2Q86V87 743 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 SPICE1Q8N0Z3 855 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 DAGLBQ8NCG7 672 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 ZNF280CQ8ND82 737 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 GPKOWQ92917 476 aaPredicted RBP eCLIP15.45■□□□□ 0.06
VMP1-217ENST00000593168 TFIP11Q9UBB9 837 aaKnown RBP15.45■□□□□ 0.06
VMP1-217ENST00000593168 CPA4Q9UI42 421 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 RCOR1Q9UKL0 485 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 PCDHA4Q9UN74 947 aa15.45■□□□□ 0.06
VMP1-217ENST00000593168 FIBPO43427 364 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 GNA11P29992 359 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 STAT2P52630 851 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 PRMT2P55345 433 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 BACE1P56817 501 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 SPP2Q13103 211 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 FAM83BQ5T0W9 1011 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 PPP1R18Q6NYC8 613 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 OXER1Q8TDS5 423 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 TNFRSF25Q93038 417 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 TRIM47Q96LD4 638 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 USP28Q96RU2 1077 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 GDPD2Q9HCC8 539 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 C6orf50Q9HD87 102 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 RTEL1Q9NZ71 1219 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 SRRDQ9UH36 339 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 FEM1BQ9UK73 627 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 ZHX2Q9Y6X8 837 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 MYH15Q9Y2K3 1946 aa15.44■□□□□ 0.06
VMP1-217ENST00000593168 ADGRA2Q96PE1 1338 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 TRAK2O60296 914 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 OSBPP22059 807 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 PSMC4P43686 418 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 NAPAP54920 295 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 PPATQ06203 517 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 NR5A1Q13285 461 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 ZYXQ15942 572 aaKnown RBP15.43■□□□□ 0.06
VMP1-217ENST00000593168 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 BLIDQ8IZY5 108 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 C12orf42Q96LP6 360 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
VMP1-217ENST00000593168 SMCO2A6NFE2 343 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 M0R2N6 131 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 YEATS4O95619 227 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 NASPP49321 788 aaPredicted RBP15.42■□□□□ 0.06
VMP1-217ENST00000593168 TRAF1Q13077 416 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 IKQ13123 557 aaPredicted RBP15.42■□□□□ 0.06
VMP1-217ENST00000593168 MTMR2Q13614 643 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 CDC37Q16543 378 aaPredicted RBP15.42■□□□□ 0.06
VMP1-217ENST00000593168 RILPL1Q5EBL4 403 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 ANO1Q5XXA6 986 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 LEO1Q8WVC0 666 aaPredicted RBP15.42■□□□□ 0.06
VMP1-217ENST00000593168 DPF3Q92784 378 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 AFG3L2Q9Y4W6 797 aa15.42■□□□□ 0.06
VMP1-217ENST00000593168 RANBP2P49792 3224 aaKnown RBP15.41■□□□□ 0.06
VMP1-217ENST00000593168 PDHXO00330 501 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 PPP1R11O60927 126 aaPredicted RBP15.41■□□□□ 0.06
VMP1-217ENST00000593168 GRK4P32298 578 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 UBE2HP62256 183 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 MOGSQ13724 837 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 SH3D19Q5HYK7 790 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 UBE2Q1Q7Z7E8 422 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 BICD2Q8TD16 824 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 COA7Q96BR5 231 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 AMNQ9BXJ7 453 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
VMP1-217ENST00000593168 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 MBD3O95983 291 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 CCL5P13501 91 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms