RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 GIMAP8Q8ND71 665 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 BRWD3Q6RI45 1802 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 FECHP22830 423 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 CBX1P83916 185 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 RAD9BQ6WBX8 426 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 THAP9Q9H5L6 903 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 TRIM49BA6NDI0 452 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 ALDH1B1P30837 517 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 TECP42680 631 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 FXR1P51114 621 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 PPP1R18Q6NYC8 613 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 NLGN1Q8N2Q7 840 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 LRRN4CLQ8ND94 238 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 LRRC15Q8TF66 581 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 CALML4Q96GE6 196 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 TRIM47Q96LD4 638 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 TMX4Q9H1E5 349 aaPredicted RBP18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 MRPL44Q9H9J2 332 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 TMEM260Q9NX78 707 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
PRKCSH-217ENST00000592741 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 G3V3G9 751 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 HLA-DOAP06340 250 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 EEF1GP26641 437 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 AMPD3Q01432 767 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 UBXN1Q04323 297 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 DOK7Q18PE1 504 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 DCAF8Q5TAQ9 597 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 FBXO38Q6PIJ6 1188 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 TMTC1Q8IUR5 882 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 DHTKD1Q96HY7 919 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 WDR24Q96S15 920 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 C7orf25Q9BPX7 421 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 EXOC1Q9NV70 894 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 OGFRQ9NZT2 677 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 MAGEC2Q9UBF1 373 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 CALCRLQ16602 461 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 HHIPL2Q6UWX4 724 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 PROM2Q8N271 834 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 COA7Q96BR5 231 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 TRIM9Q9C026 710 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 ABHD10Q9NUJ1 306 aa18.61■□□□□ 0.57
PRKCSH-217ENST00000592741 PPP1R2P41236 205 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 SCNN1DP51172 638 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 ASIC1P78348 528 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 ZNF543Q08ER8 600 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 IRF2BP1Q8IU81 584 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 TEKT1Q969V4 418 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 MXD3Q9BW11 206 aa18.6■□□□□ 0.57
PRKCSH-217ENST00000592741 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 SHMT1P34896 483 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 PDE6BP35913 854 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 PMS1P54277 932 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 PDE4DQ08499 809 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 TMEM266Q2M3C6 531 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 CDC42EP5Q6NZY7 148 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 CLEC10AQ8IUN9 316 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 UBXN4Q92575 508 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 CARD6Q9BX69 1037 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 DDX41Q9UJV9 622 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 PNMA6FA0A0J9YX94 578 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 LGALS16A8MUM7 142 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 TXKP42681 527 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 TTI2Q6NXR4 508 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 CYP26C1Q6V0L0 522 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 SMAP1Q8IYB5 467 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 MTMR9Q96QG7 549 aa18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 MMTAG2Q9BU76 263 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-217ENST00000592741 ADAMTSL1Q8N6G6 1762 aa18.58■□□□□ 0.57
PRKCSH-217ENST00000592741 EFCAB8A8MWE9 144 aa18.58■□□□□ 0.57
PRKCSH-217ENST00000592741 TADA3O75528 432 aa18.58■□□□□ 0.57
PRKCSH-217ENST00000592741 FXR2P51116 673 aaKnown RBP eCLIP18.58■□□□□ 0.572e-6■□□□□ 9.9
PRKCSH-217ENST00000592741 MAP3K9P80192 1104 aa18.58■□□□□ 0.57
PRKCSH-217ENST00000592741 RAB34Q9BZG1 259 aa18.58■□□□□ 0.57
PRKCSH-217ENST00000592741 JMJD4Q9H9V9 463 aa18.58■□□□□ 0.57
PRKCSH-217ENST00000592741 A0A1W2PQC6 194 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 KIF5CO60282 957 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 H2AFXP16104 143 aaPredicted RBP18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 CCNE1P24864 410 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 CCDC96Q2M329 555 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 ARHGAP29Q52LW3 1261 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 GPATCH4Q5T3I0 446 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 ADGRF4Q8IZF3 695 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 P2RX5Q93086 422 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 RIC8AQ9NPQ8 531 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 LZTFL1Q9NQ48 299 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 STK17AQ9UEE5 414 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 LRWD1Q9UFC0 647 aa18.58■□□□□ 0.56
PRKCSH-217ENST00000592741 MRFAP1Q9Y605 127 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms