RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PP2D1A8MPX8 630 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 EIF3CLB5ME19 914 aaKnown RBP13□□□□□ -0.33
ZNF540-210ENST00000592533 HOXA7P31268 230 aaPredicted RBP13□□□□□ -0.33
ZNF540-210ENST00000592533 GSTO1P78417 241 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 ZBED6P86452 979 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 KRT25Q7Z3Z0 450 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
ZNF540-210ENST00000592533 P2RX5Q93086 422 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 ERGIC2Q96RQ1 377 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 EIF3CQ99613 913 aaKnown RBP13□□□□□ -0.33
ZNF540-210ENST00000592533 TRIM9Q9C026 710 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 ANO9A1A5B4 782 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 TARSL2A2RTX5 802 aaKnown RBP13□□□□□ -0.33
ZNF540-210ENST00000592533 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
ZNF540-210ENST00000592533 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 TUBGCP2Q9BSJ2 902 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 KCNQ2O43526 872 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 OR52Z1P0C646 297 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 PLCG1P19174 1290 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 MCM3P25205 808 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 HNRNPH3P31942 346 aaKnown RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 NOVP48745 357 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 SH3RF3Q8TEJ3 882 aaPredicted RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 TMEM47Q9BQJ4 181 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 PDE11AQ9HCR9 933 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 ABCB11O95342 1321 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 LDHBP07195 334 aaKnown RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 CYLC1P35663 651 aaPredicted RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 USP14P54578 494 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 CASP8Q14790 479 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 MIIPQ5JXC2 388 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 CSGALNACT2Q8N6G5 542 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
ZNF540-210ENST00000592533 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 GUCA1BQ9UMX6 200 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 ESYT2A0FGR8 921 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 RASA1P20936 1047 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 HEATR3Q7Z4Q2 680 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 CABP7Q86V35 215 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 AMOTL1Q8IY63 956 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 DYNLL2Q96FJ2 89 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 TRIM10Q9UDY6 481 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
ZNF540-210ENST00000592533 A0A0G2JS52 829 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 B4DLN1 442 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 KRT86O43790 486 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 RHOXF2BP0C7M4 288 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 AARSP49588 968 aaKnown RBP eCLIP12.98□□□□□ -0.338e-6■■■■■ 52.4
ZNF540-210ENST00000592533 CKAP4Q07065 602 aaKnown RBP12.98□□□□□ -0.33
ZNF540-210ENST00000592533 NCAPH2Q6IBW4 605 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 FOXR2Q6PJQ5 311 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 FAM71BQ8TC56 605 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 RHOXF2Q9BQY4 288 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 MKNK2Q9HBH9 465 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 ZNF287Q9HBT7 754 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 MED4Q9NPJ6 270 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 RPS6KA5O75582 802 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 BAG3O95817 575 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 NONOQ15233 471 aaKnown RBP eCLIP12.98□□□□□ -0.33
ZNF540-210ENST00000592533 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 CCDC122Q5T0U0 273 aa12.98□□□□□ -0.33
ZNF540-210ENST00000592533 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
ZNF540-210ENST00000592533 hCG_1984214I3L0E3 225 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ZNF572Q7Z3I7 529 aaPredicted RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ZNF713Q8N859 430 aaPredicted RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 RASSF8Q8NHQ8 419 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 GOLGA5Q8TBA6 731 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 GNA11P29992 359 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 AMPD3Q01432 767 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 MCM6Q14566 821 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 C16orf86Q6ZW13 317 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 C10orf71Q711Q0 1435 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 MMTAG2Q9BU76 263 aaKnown RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ACBD3Q9H3P7 528 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 NHEJ1Q9H9Q4 299 aaPredicted RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
ZNF540-210ENST00000592533 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 LCA5LO95447 670 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 CENPPQ6IPU0 288 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 NEK8Q86SG6 692 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 NEDD1Q8NHV4 660 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms