RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 STK11IPQ8N1F8 1099 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.23■□□□□ 0.83
POLR2E-208ENST00000591709 EPOPA6NHQ4 379 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 RAB11FIP3O75154 756 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 CABYRO75952 493 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 PSMC6P62333 389 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 FSCN1Q16658 493 aaKnown RBP20.22■□□□□ 0.83
POLR2E-208ENST00000591709 CTR9Q6PD62 1173 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 RPUSD2Q8IZ73 545 aaKnown RBP20.22■□□□□ 0.83
POLR2E-208ENST00000591709 CLASRPQ8N2M8 674 aaKnown RBP20.22■□□□□ 0.83
POLR2E-208ENST00000591709 VWCEQ96DN2 955 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 SLC38A10Q9HBR0 1119 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 SLC4A4Q9Y6R1 1079 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 SIP14410 1827 aa20.22■□□□□ 0.83
POLR2E-208ENST00000591709 PIEZO1Q92508 2521 aa20.21■□□□□ 0.83
POLR2E-208ENST00000591709 FAM86C2PA6NEL3 165 aa20.21■□□□□ 0.83
POLR2E-208ENST00000591709 TTLL4Q14679 1199 aa20.21■□□□□ 0.83
POLR2E-208ENST00000591709 TMEM67Q5HYA8 995 aa20.21■□□□□ 0.83
POLR2E-208ENST00000591709 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
POLR2E-208ENST00000591709 KHSRPQ92945 711 aaKnown RBP eCLIP20.21■□□□□ 0.83
POLR2E-208ENST00000591709 GNEQ9Y223 722 aaKnown RBP20.21■□□□□ 0.83
POLR2E-208ENST00000591709 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
POLR2E-208ENST00000591709 IFIT2P09913 472 aaKnown RBP20.2■□□□□ 0.82
POLR2E-208ENST00000591709 RASA1P20936 1047 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 DEFB128Q7Z7B8 93 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 AGBL1Q96MI9 1066 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 CRBNQ96SW2 442 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.2■□□□□ 0.82
POLR2E-208ENST00000591709 AP5M1Q9H0R1 490 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 C11orf16Q9NQ32 467 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 NYAP2Q9P242 653 aa20.2■□□□□ 0.82
POLR2E-208ENST00000591709 TLL1O43897 1013 aa20.19■□□□□ 0.82
POLR2E-208ENST00000591709 POU3F3P20264 500 aaPredicted RBP20.19■□□□□ 0.82
POLR2E-208ENST00000591709 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
POLR2E-208ENST00000591709 BOLA2Q9H3K6 86 aa20.19■□□□□ 0.82
POLR2E-208ENST00000591709 ARPP21Q9UBL0 812 aaPredicted RBP20.19■□□□□ 0.82
POLR2E-208ENST00000591709 COG5Q9UP83 839 aa20.19■□□□□ 0.82
POLR2E-208ENST00000591709 DYNC1LI2O43237 492 aaPredicted RBP20.18■□□□□ 0.82
POLR2E-208ENST00000591709 ZEB2O60315 1214 aa20.18■□□□□ 0.82
POLR2E-208ENST00000591709 ARHGEF15O94989 841 aa20.18■□□□□ 0.82
POLR2E-208ENST00000591709 SMPD1P17405 629 aa20.18■□□□□ 0.82
POLR2E-208ENST00000591709 ARNTL2Q8WYA1 636 aa20.18■□□□□ 0.82
POLR2E-208ENST00000591709 ACAD9Q9H845 621 aa20.18■□□□□ 0.82
POLR2E-208ENST00000591709 A1CFQ9NQ94 594 aaKnown RBP20.18■□□□□ 0.82
POLR2E-208ENST00000591709 CLIP2Q9UDT6 1046 aa20.18■□□□□ 0.82
POLR2E-208ENST00000591709 SOWAHBA6NEL2 793 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 PFKMP08237 780 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 CYP2C9P11712 490 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 OAZ1P54368 228 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 TMEM63BQ5T3F8 832 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 EEPD1Q7L9B9 569 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 FBXO16Q8IX29 292 aaPredicted RBP20.17■□□□□ 0.82
POLR2E-208ENST00000591709 LRRC47Q8N1G4 583 aaKnown RBP20.17■□□□□ 0.82
POLR2E-208ENST00000591709 ALDH8A1Q9H2A2 487 aaPredicted RBP20.17■□□□□ 0.82
POLR2E-208ENST00000591709 PDGFCQ9NRA1 345 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 TRMT13Q9NUP7 481 aaKnown RBP20.17■□□□□ 0.82
POLR2E-208ENST00000591709 FEM1BQ9UK73 627 aa20.17■□□□□ 0.82
POLR2E-208ENST00000591709 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
POLR2E-208ENST00000591709 HLA-CQ95604 372 aa20.16■□□□□ 0.82
POLR2E-208ENST00000591709 SEZ6LQ9BYH1 1024 aa20.16■□□□□ 0.82
POLR2E-208ENST00000591709 LRRCC1Q9C099 1032 aa20.16■□□□□ 0.82
POLR2E-208ENST00000591709 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
POLR2E-208ENST00000591709 MKNK2Q9HBH9 465 aa20.16■□□□□ 0.82
POLR2E-208ENST00000591709 RNF146Q9NTX7 359 aa20.16■□□□□ 0.82
POLR2E-208ENST00000591709 ISY1Q9ULR0 285 aaKnown RBP20.16■□□□□ 0.82
POLR2E-208ENST00000591709 PCDHB15Q9Y5E8 787 aa20.16■□□□□ 0.82
POLR2E-208ENST00000591709 ASB14A6NK59 587 aa20.15■□□□□ 0.82
POLR2E-208ENST00000591709 GPR37L1O60883 481 aa20.15■□□□□ 0.82
POLR2E-208ENST00000591709 TAP1Q03518 808 aa20.15■□□□□ 0.82
POLR2E-208ENST00000591709 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
POLR2E-208ENST00000591709 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
POLR2E-208ENST00000591709 TNKSO95271 1327 aa20.14■□□□□ 0.81
POLR2E-208ENST00000591709 MINDY4BA8MYZ0 360 aa20.14■□□□□ 0.81
POLR2E-208ENST00000591709 SPRED2Q7Z698 418 aa20.14■□□□□ 0.81
POLR2E-208ENST00000591709 CEP95Q96GE4 821 aa20.14■□□□□ 0.81
POLR2E-208ENST00000591709 DCTPP1Q9H773 170 aa20.14■□□□□ 0.81
POLR2E-208ENST00000591709 IGKV6D-41A0A0C4DH26 115 aa20.13■□□□□ 0.81
POLR2E-208ENST00000591709 ACTN1P12814 892 aa20.13■□□□□ 0.81
POLR2E-208ENST00000591709 GRB10Q13322 594 aa20.13■□□□□ 0.81
POLR2E-208ENST00000591709 ALYREFQ86V81 257 aaKnown RBP20.13■□□□□ 0.81
POLR2E-208ENST00000591709 HAUS7Q99871 368 aa20.13■□□□□ 0.81
POLR2E-208ENST00000591709 ZNF536O15090 1300 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 PRDM1O75626 825 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 ATP5JP18859 108 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 SBK1Q52WX2 424 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 GMCL1P1Q8NEA9 526 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 CHMP4CQ96CF2 233 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 CD320Q9NPF0 282 aa20.12■□□□□ 0.81
POLR2E-208ENST00000591709 TMEM232C9JQI7 657 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 SUPT20HL2P0C7V6 817 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 BMP3P12645 472 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 ALAS1P13196 640 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 STAT2P52630 851 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 IKQ13123 557 aaPredicted RBP20.11■□□□□ 0.81
POLR2E-208ENST00000591709 SLFN13Q68D06 897 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 IQSEC1Q6DN90 963 aa20.11■□□□□ 0.81
POLR2E-208ENST00000591709 HERC6Q8IVU3 1022 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms