RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 UMODL1Q5DID0 1318 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 FDX1P10109 184 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 CYP2C18P33260 490 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 TNFAIP2Q03169 654 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 ZNF365Q70YC5 407 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 KCTD1Q719H9 257 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 FAM160B2Q86V87 743 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 SLC43A3Q8NBI5 491 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 TRERF1Q96PN7 1200 aa16.52■□□□□ 0.24
SF3A2-205ENST00000590034 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 ALAS1P13196 640 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 SMPD1P17405 629 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
SF3A2-205ENST00000590034 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
SF3A2-205ENST00000590034 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 TLK2Q86UE8 772 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 FBXO16Q8IX29 292 aaPredicted RBP16.51■□□□□ 0.23
SF3A2-205ENST00000590034 TMEM199Q8N511 208 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 PURBQ96QR8 312 aaKnown RBP16.51■□□□□ 0.23
SF3A2-205ENST00000590034 PDGFCQ9NRA1 345 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 PRR12Q9ULL5 1215 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 STX8Q9UNK0 236 aa16.51■□□□□ 0.23
SF3A2-205ENST00000590034 ASB14A6NK59 587 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 ERC2O15083 957 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 PLA2G6O60733 806 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 SLC3A2P08195 630 aaKnown RBP16.5■□□□□ 0.23
SF3A2-205ENST00000590034 FSCN1Q16658 493 aaKnown RBP16.5■□□□□ 0.23
SF3A2-205ENST00000590034 TKFCQ3LXA3 575 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
SF3A2-205ENST00000590034 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
SF3A2-205ENST00000590034 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
SF3A2-205ENST00000590034 CXXC1Q9P0U4 656 aaPredicted RBP16.5■□□□□ 0.23
SF3A2-205ENST00000590034 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
SF3A2-205ENST00000590034 TLR3O15455 904 aaKnown RBP16.49■□□□□ 0.23
SF3A2-205ENST00000590034 NOVP48745 357 aa16.49■□□□□ 0.23
SF3A2-205ENST00000590034 RCSD1Q6JBY9 416 aa16.49■□□□□ 0.23
SF3A2-205ENST00000590034 IL23AQ9NPF7 189 aa16.49■□□□□ 0.23
SF3A2-205ENST00000590034 DYNC1LI2O43237 492 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-205ENST00000590034 MX1P20591 662 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 PSMC6P62333 389 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 ITGA7Q13683 1181 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 HERVK_113Q902F9 699 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 VWCEQ96DN2 955 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 TRPV6Q9H1D0 765 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 HIPK3Q9H422 1215 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 PRDM12Q9H4Q4 367 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 MTMR7Q9Y216 660 aa16.48■□□□□ 0.23
SF3A2-205ENST00000590034 NCOR1O75376 2440 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 SCN5AQ14524 2016 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 REV3LO60673 3130 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 B4GALT4O60513 344 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 ADGRE1Q14246 886 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 TTBK2Q6IQ55 1244 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 NSMFQ6X4W1 530 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 NOC4LQ9BVI4 516 aaKnown RBP16.47■□□□□ 0.23
SF3A2-205ENST00000590034 WNT8AQ9H1J5 351 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 ANAPC4Q9UJX5 808 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
SF3A2-205ENST00000590034 RANBP6O60518 1105 aaKnown RBP16.46■□□□□ 0.23
SF3A2-205ENST00000590034 CABYRO75952 493 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 ICAM1P05362 532 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 FGRP09769 529 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 SLC16A2P36021 539 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 CCL23P55773 120 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 IQSEC1Q6DN90 963 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
SF3A2-205ENST00000590034 RANBP17Q9H2T7 1088 aaKnown RBP16.46■□□□□ 0.23
SF3A2-205ENST00000590034 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.23
SF3A2-205ENST00000590034 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.22
SF3A2-205ENST00000590034 NFIBO00712 420 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 ORC4O43929 436 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 TJAP1Q5JTD0 557 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 OTOP2Q7RTS6 562 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 VTA1Q9NP79 307 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 Q9Y3F1 56 aa16.45■□□□□ 0.22
SF3A2-205ENST00000590034 FGBP02675 491 aa16.44■□□□□ 0.22
SF3A2-205ENST00000590034 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
SF3A2-205ENST00000590034 BAATQ14032 418 aaPredicted RBP16.44■□□□□ 0.22
SF3A2-205ENST00000590034 DUSP28Q4G0W2 176 aa16.44■□□□□ 0.22
SF3A2-205ENST00000590034 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
SF3A2-205ENST00000590034 KIAA1211Q6ZU35 1233 aa16.44■□□□□ 0.22
SF3A2-205ENST00000590034 SYMPKQ92797 1274 aaKnown RBP16.44■□□□□ 0.22
SF3A2-205ENST00000590034 GAS2L1Q99501 681 aaPredicted RBP16.44■□□□□ 0.22
SF3A2-205ENST00000590034 TMEM47Q9BQJ4 181 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms