RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ADCY5O95622 1261 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 GNA11P29992 359 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 SLC16A2P36021 539 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 ADCY7P51828 1080 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 PTGDRQ13258 359 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 INF2Q27J81 1249 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 LONRF3Q496Y0 759 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 KRBA2Q6ZNG9 492 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 KRT25Q7Z3Z0 450 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 CNNM3Q8NE01 707 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 MKL1Q969V6 931 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 COA7Q96BR5 231 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 ZMYND12Q9H0C1 365 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 JMJD4Q9H9V9 463 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 HERC5Q9UII4 1024 aaKnown RBP9.98□□□□□ -0.81
SMAD4-206ENST00000588860 HOOK1Q9UJC3 728 aaKnown RBP9.98□□□□□ -0.81
SMAD4-206ENST00000588860 RBBP6Q7Z6E9 1792 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 SHTN1A0MZ66 631 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 VWA3AA6NCI4 1184 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 USP17L10C9JJH3 530 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 GOLGA6L19H0YKK7 550 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 BIN1O00499 593 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 POLR2DO15514 142 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 PTMAP06454 111 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 HOXB3P14651 431 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 SLC1A4P43007 532 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 NLRP12P59046 1061 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 JAG1P78504 1218 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 PNOCQ13519 176 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 RRP1BQ14684 758 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 NONOQ15233 471 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 FKBP1CQ5VVH2 108 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 C9orf131Q5VYM1 1079 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 REXO1Q8N1G1 1221 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 SYMPKQ92797 1274 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 ZBED3Q96IU2 234 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
SMAD4-206ENST00000588860 MYOZ2Q9NPC6 264 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 CCDC39Q9UFE4 941 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 SERTAD1Q9UHV2 236 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 BOLA1Q9Y3E2 137 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 LTBP3Q9NS15 1303 aa9.97□□□□□ -0.81
SMAD4-206ENST00000588860 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
SMAD4-206ENST00000588860 ACTN4O43707 911 aaKnown RBP9.96□□□□□ -0.82
SMAD4-206ENST00000588860 NDUFB10O96000 172 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 CTCFP49711 727 aaPredicted RBP9.96□□□□□ -0.82
SMAD4-206ENST00000588860 IQCB1Q15051 598 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 DPCR1Q3MIW9 517 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 JAKMIP3Q5VZ66 844 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 USP49Q70CQ1 688 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 FAM83AQ86UY5 434 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 SIAH1Q8IUQ4 282 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 AOPEPQ8N6M6 819 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 PDILTQ8N807 584 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 GMCL1P1Q8NEA9 526 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 DHX58Q96C10 678 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 ARHGEF10LQ9HCE6 1279 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 TMEM260Q9NX78 707 aa9.96□□□□□ -0.82
SMAD4-206ENST00000588860 BIN2Q9UBW5 565 aaPredicted RBP9.96□□□□□ -0.82
SMAD4-206ENST00000588860 BECN2A8MW95 431 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 ZBTB5O15062 677 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 AP5Z1O43299 807 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 PPP1R11O60927 126 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 RPS12P25398 132 aaKnown RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 LONP1P36776 959 aaKnown RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 TNNI2P48788 182 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 GMPSP49915 693 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 ZNF280AP59817 542 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 IKQ13123 557 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 POSTNQ15063 836 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 CDC37Q16543 378 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 IL17AQ16552 155 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 QRICH1Q2TAL8 776 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 HS1BP3Q53T59 392 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 ARL6IP4Q66PJ3 421 aaKnown RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 ISM2Q6H9L7 571 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 DHX40Q8IX18 779 aaKnown RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 ELOA2Q8IYF1 753 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 GRAMD1CQ8IYS0 662 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 C4orf32Q8N8J7 132 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 MTMR8Q96EF0 704 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 GMCL1Q96IK5 515 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 EPSTI1Q96J88 318 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 NUP88Q99567 741 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-206ENST00000588860 RIC8AQ9NPQ8 531 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 TUBE1Q9UJT0 475 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 ZBTB21Q9ULJ3 1066 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 GJA3Q9Y6H8 435 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 PARP14Q460N5 1801 aa9.95□□□□□ -0.82
SMAD4-206ENST00000588860 PHIPQ8WWQ0 1821 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 A0A087X0B3 334 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 CCDC85CA6NKD9 419 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms