RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MUM1L1Q5H9M0 696 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 CCDC129Q6ZRS4 1044 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 KCTD1Q719H9 257 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 TLK2Q86UE8 772 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 CHURC1Q8WUH1 139 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 TIFAQ96CG3 184 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 PBX4Q9BYU1 374 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 PPP1R12CQ9BZL4 782 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 ZNF576Q9H609 170 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 INCENPQ9NQS7 918 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 GRXCR1A8MXD5 290 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 ERC2O15083 957 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 SNAP25P60880 206 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 TNFAIP2Q03169 654 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 TMEM63BQ5T3F8 832 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 TAPT1Q6NXT6 567 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 CXCL17Q6UXB2 119 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 TRERF1Q96PN7 1200 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 CYP39A1Q9NYL5 469 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 PRR12Q9ULL5 1215 aa21.86■■□□□ 1.09
CCDC43-204ENST00000588687 UMODL1Q5DID0 1318 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 ASB14A6NK59 587 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 SLC3A2P08195 630 aaKnown RBP21.85■■□□□ 1.09
CCDC43-204ENST00000588687 SMPD1P17405 629 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 MX1P20591 662 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 CTDSPL2Q05D32 466 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 VPS53Q5VIR6 699 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 PSRC1Q6PGN9 363 aaPredicted RBP21.85■■□□□ 1.09
CCDC43-204ENST00000588687 MORC4Q8TE76 937 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 PDGFCQ9NRA1 345 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 ANAPC4Q9UJX5 808 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 STX8Q9UNK0 236 aa21.85■■□□□ 1.09
CCDC43-204ENST00000588687 FGRP09769 529 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 ACRP10323 421 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 ALAS1P13196 640 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 CYP2C18P33260 490 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 FSCN1Q16658 493 aaKnown RBP21.84■■□□□ 1.09
CCDC43-204ENST00000588687 RCSD1Q6JBY9 416 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 ZNF365Q70YC5 407 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 FBXO16Q8IX29 292 aaPredicted RBP21.84■■□□□ 1.09
CCDC43-204ENST00000588687 TMEM199Q8N511 208 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 VWCEQ96DN2 955 aa21.84■■□□□ 1.09
CCDC43-204ENST00000588687 PURBQ96QR8 312 aaKnown RBP21.84■■□□□ 1.09
CCDC43-204ENST00000588687 CXXC1Q9P0U4 656 aaPredicted RBP21.84■■□□□ 1.09
CCDC43-204ENST00000588687 TSPY2A6NKD2 308 aa21.83■■□□□ 1.09
CCDC43-204ENST00000588687 TLR3O15455 904 aaKnown RBP21.83■■□□□ 1.09
CCDC43-204ENST00000588687 IKQ13123 557 aaPredicted RBP21.83■■□□□ 1.09
CCDC43-204ENST00000588687 PPP4R3BQ5MIZ7 849 aa21.83■■□□□ 1.09
CCDC43-204ENST00000588687 CCDC174Q6PII3 467 aa21.83■■□□□ 1.09
CCDC43-204ENST00000588687 VTI1AQ96AJ9 217 aa21.83■■□□□ 1.09
CCDC43-204ENST00000588687 RANBP17Q9H2T7 1088 aaKnown RBP21.83■■□□□ 1.09
CCDC43-204ENST00000588687 IL23AQ9NPF7 189 aa21.83■■□□□ 1.09
CCDC43-204ENST00000588687 ISY1Q9ULR0 285 aaKnown RBP21.83■■□□□ 1.09
CCDC43-204ENST00000588687 ORC4O43929 436 aa21.82■■□□□ 1.08
CCDC43-204ENST00000588687 CABYRO75952 493 aa21.82■■□□□ 1.08
CCDC43-204ENST00000588687 ICAM1P05362 532 aa21.82■■□□□ 1.08
CCDC43-204ENST00000588687 ITGA7Q13683 1181 aa21.82■■□□□ 1.08
CCDC43-204ENST00000588687 HERVK_113Q902F9 699 aa21.82■■□□□ 1.08
CCDC43-204ENST00000588687 WNT8AQ9H1J5 351 aa21.82■■□□□ 1.08
CCDC43-204ENST00000588687 MYO9BQ13459 2157 aa21.81■■□□□ 1.08
CCDC43-204ENST00000588687 NOC4LQ9BVI4 516 aaKnown RBP21.81■■□□□ 1.08
CCDC43-204ENST00000588687 HIPK3Q9H422 1215 aa21.81■■□□□ 1.08
CCDC43-204ENST00000588687 SCN10AQ9Y5Y9 1956 aa21.81■■□□□ 1.08
CCDC43-204ENST00000588687 B4GALT4O60513 344 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 TTBK2Q6IQ55 1244 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 BTNL9Q6UXG8 535 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 EEPD1Q7L9B9 569 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 DCAF4Q8WV16 495 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 TRPV6Q9H1D0 765 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 VTA1Q9NP79 307 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 PRDM6Q9NQX0 595 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 CCPG1Q9ULG6 757 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 Q9Y3F1 56 aa21.8■■□□□ 1.08
CCDC43-204ENST00000588687 BDP1A6H8Y1 2624 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 TANC1Q9C0D5 1861 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 DYNC1LI2O43237 492 aaPredicted RBP21.79■■□□□ 1.08
CCDC43-204ENST00000588687 PSMC6P62333 389 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 ADGRE1Q14246 886 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 ALX1Q15699 326 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 IQSEC1Q6DN90 963 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 NOL8Q76FK4 1167 aaKnown RBP21.79■■□□□ 1.08
CCDC43-204ENST00000588687 PRDM12Q9H4Q4 367 aa21.79■■□□□ 1.08
CCDC43-204ENST00000588687 NFIBO00712 420 aa21.78■■□□□ 1.08
CCDC43-204ENST00000588687 NSMFQ6X4W1 530 aa21.78■■□□□ 1.08
CCDC43-204ENST00000588687 AP5M1Q9H0R1 490 aa21.78■■□□□ 1.08
CCDC43-204ENST00000588687 YBX2Q9Y2T7 364 aaKnown RBP21.78■■□□□ 1.08
CCDC43-204ENST00000588687 ZMYM6O95789 1325 aa21.78■■□□□ 1.08
CCDC43-204ENST00000588687 RANBP6O60518 1105 aaKnown RBP21.77■■□□□ 1.08
CCDC43-204ENST00000588687 SLC16A2P36021 539 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 ALDH5A1P51649 535 aaPredicted RBP21.77■■□□□ 1.08
CCDC43-204ENST00000588687 CCDC96Q2M329 555 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 DUSP28Q4G0W2 176 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 TJAP1Q5JTD0 557 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 AKNAD1Q5T1N1 836 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 SLC30A10Q6XR72 485 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 SEZ6LQ9BYH1 1024 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 LAMA4Q16363 1823 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 NCOR1O75376 2440 aa21.77■■□□□ 1.08
CCDC43-204ENST00000588687 SCN5AQ14524 2016 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms