RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 A0A1W2PQ64 194 aa29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 A0A1W2PQD8 194 aa29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 ZNF536O15090 1300 aa29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 ZNF174Q15697 407 aa29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 SAMD1Q6SPF0 538 aaPredicted RBP29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 SLC38A10Q9HBR0 1119 aa29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 TMOD4Q9NZQ9 345 aa29.72■■■□□ 2.35
SCAMP4-210ENST00000588555 LOC285556D6RIA3 1793 aa29.71■■■□□ 2.35
SCAMP4-210ENST00000588555 MEIS2O14770 477 aa29.71■■■□□ 2.35
SCAMP4-210ENST00000588555 BMP15O95972 392 aa29.71■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L15C9J2P7 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L13C9JLJ4 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L11C9JVI0 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L18D6R9N7 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L22D6RA61 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L17D6RBQ6 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L19D6RCP7 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L20D6RJB6 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 ICAM1P05362 532 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L24Q0WX57 530 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 USP17L6PQ6QN14 398 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 CCAR1Q8IX12 1150 aaKnown RBP29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 OTUD5Q96G74 571 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 GOLPH3LQ9H4A5 285 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 FBXO2Q9UK22 296 aaPredicted RBP29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 MRVI1Q9Y6F6 885 aa29.7■■■□□ 2.35
SCAMP4-210ENST00000588555 IRF6O14896 467 aa29.69■■■□□ 2.34
SCAMP4-210ENST00000588555 PTPREP23469 700 aa29.69■■■□□ 2.34
SCAMP4-210ENST00000588555 TBCKQ8TEA7 893 aa29.69■■■□□ 2.34
SCAMP4-210ENST00000588555 CATSPERGQ6ZRH7 1159 aa29.69■■■□□ 2.34
SCAMP4-210ENST00000588555 KRI1Q8N9T8 703 aaKnown RBP29.69■■■□□ 2.34
SCAMP4-210ENST00000588555 CUTAO60888 179 aa29.68■■■□□ 2.34
SCAMP4-210ENST00000588555 ATP2C1P98194 919 aaPredicted RBP29.68■■■□□ 2.34
SCAMP4-210ENST00000588555 NEK8Q86SG6 692 aa29.68■■■□□ 2.34
SCAMP4-210ENST00000588555 ZNF526Q8TF50 670 aaPredicted RBP29.68■■■□□ 2.34
SCAMP4-210ENST00000588555 KCNH4Q9UQ05 1017 aa29.68■■■□□ 2.34
SCAMP4-210ENST00000588555 SRPRBQ9Y5M8 271 aaKnown RBP29.68■■■□□ 2.34
SCAMP4-210ENST00000588555 A0A0G2JLL6 359 aaPredicted RBP29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 UNCXA6NJT0 531 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 EDIL3O43854 480 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 MCM7P33993 719 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 PTGDRQ13258 359 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 PPIL2Q13356 520 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 PRRT2Q7Z6L0 340 aaPredicted RBP29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 TEX2Q8IWB9 1127 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 C4orf32Q8N8J7 132 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 MRPS27Q92552 414 aaKnown RBP29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 CLIC6Q96NY7 704 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 ZNF408Q9H9D4 720 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 ADAMTS5Q9UNA0 930 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 ABCB11O95342 1321 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 CXCL11O14625 94 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 NR1I2O75469 434 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 FDX1P10109 184 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 CMA1P23946 247 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 ZSCAN23Q3MJ62 389 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 FSIP1Q8NA03 581 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 ATG4CQ96DT6 458 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 AGBL1Q96MI9 1066 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 P2RX7Q99572 595 aaKnown RBP29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 DACT1Q9NYF0 836 aa29.67■■■□□ 2.34
SCAMP4-210ENST00000588555 PIK3CDO00329 1044 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 VWA5AO00534 786 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 DSG3P32926 999 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 GRIN1Q05586 938 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 SHC4Q6S5L8 630 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 ENGASEQ8NFI3 743 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 SYAP1Q96A49 352 aaPredicted RBP29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 WNK4Q96J92 1243 aa29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 MRPL11Q9Y3B7 192 aaKnown RBP29.66■■■□□ 2.34
SCAMP4-210ENST00000588555 AP3B2Q13367 1082 aa29.65■■■□□ 2.34
SCAMP4-210ENST00000588555 SNW1Q13573 536 aaKnown RBP29.65■■■□□ 2.34
SCAMP4-210ENST00000588555 OPTNQ96CV9 577 aa29.65■■■□□ 2.34
SCAMP4-210ENST00000588555 CCPG1Q9ULG6 757 aa29.65■■■□□ 2.34
SCAMP4-210ENST00000588555 FKBP1BP68106 108 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 COG2Q14746 738 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 LETM2Q2VYF4 491 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 TREML2Q5T2D2 321 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 CCDC183Q5T5S1 534 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 REPS2Q8NFH8 660 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 MYH7BA7E2Y1 1941 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 MYPNQ86TC9 1320 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 COL11A1P12107 1806 aaPredicted RBP29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 RESP18Q5W5W9 173 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 MCTP2Q6DN12 878 aa29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 PROCA1Q8NCQ7 364 aaPredicted RBP29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 RAVER2Q9HCJ3 691 aaKnown RBP29.64■■■□□ 2.34
SCAMP4-210ENST00000588555 FAM237AA0A1B0GTK4 181 aa29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 A0A1B0GVL5 298 aa29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 ZBED4O75132 1171 aa29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 FAM160A1Q05DH4 1040 aa29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 CCDC73Q6ZRK6 1079 aa29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 ZNF579Q8NAF0 562 aaKnown RBP29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 ANO3Q9BYT9 981 aa29.63■■■□□ 2.33
SCAMP4-210ENST00000588555 GJA5P36382 358 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 ORC2Q13416 577 aaPredicted RBP29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 FMR1NBQ8N0W7 255 aaPredicted RBP29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 FERMT2Q96AC1 680 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 DDX19AQ9NUU7 478 aaKnown RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms