RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 CYP26B1Q9NR63 512 aa8.23□□□□□ -1.09
TPM4-203ENST00000586193 USP25Q9UHP3 1055 aa8.23□□□□□ -1.09
TPM4-203ENST00000586193 TAGLN3Q9UI15 199 aa8.23□□□□□ -1.09
TPM4-203ENST00000586193 ZBTB21Q9ULJ3 1066 aa8.23□□□□□ -1.09
TPM4-203ENST00000586193 ANKRD6Q9Y2G4 727 aa8.23□□□□□ -1.09
TPM4-203ENST00000586193 FHOD1Q9Y613 1164 aa8.23□□□□□ -1.09
TPM4-203ENST00000586193 COL17A1Q9UMD9 1497 aaPredicted RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 M0R082 166 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 GAS7O60861 476 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 WDHD1O75717 1129 aaPredicted RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 ERVK-21P61565 698 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 MORC3Q14149 939 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 INAVAQ3KP66 663 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 PODNQ7Z5L7 613 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 PJA1Q8NG27 643 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 DNAJB8Q8NHS0 232 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 FBXO41Q8TF61 875 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 NANOS1Q8WY41 292 aaKnown RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 E2F7Q96AV8 911 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 SARGQ9BW04 601 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 TCF7L1Q9HCS4 588 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 EMC7Q9NPA0 242 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 PRDM6Q9NQX0 595 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 GNL3LQ9NVN8 582 aaKnown RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 THG1LQ9NWX6 298 aaKnown RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 NSFL1CQ9UNZ2 370 aaKnown RBP8.22□□□□□ -1.09
TPM4-203ENST00000586193 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
TPM4-203ENST00000586193 WDR64B1ANS9 1081 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 K7ESF4 209 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 FZD9O00144 591 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 GRIK1P39086 918 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 AMPD2Q01433 879 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 PICALMQ13492 652 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 DPY19L1Q2PZI1 675 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 ZFYVE27Q5T4F4 411 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 MAP4K3Q8IVH8 894 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 DMRTC2Q8IXT2 367 aaPredicted RBP8.21□□□□□ -1.1
TPM4-203ENST00000586193 SPICE1Q8N0Z3 855 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 KREMEN2Q8NCW0 462 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 CLIP3Q96DZ5 547 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 AHCYL2Q96HN2 611 aaKnown RBP8.21□□□□□ -1.1
TPM4-203ENST00000586193 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 SLC13A1Q9BZW2 595 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 SPTLC3Q9NUV7 552 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 PNMA8BQ9ULN7 279 aaPredicted RBP8.21□□□□□ -1.1
TPM4-203ENST00000586193 DAAM1Q9Y4D1 1078 aa8.21□□□□□ -1.1
TPM4-203ENST00000586193 TRAF5O00463 557 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 LSSP48449 732 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 KLF1Q13351 362 aaPredicted RBP8.2□□□□□ -1.1
TPM4-203ENST00000586193 SNW1Q13573 536 aaKnown RBP8.2□□□□□ -1.1
TPM4-203ENST00000586193 DUOXA2Q1HG44 320 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 NBPF9Q3BBW0 867 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 ARMCX6Q7L4S7 300 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 DYMQ7RTS9 669 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 CDH24Q86UP0 819 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 ZC3H7AQ8IWR0 971 aaKnown RBP8.2□□□□□ -1.1
TPM4-203ENST00000586193 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPM4-203ENST00000586193 MFSD2AQ8NA29 543 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 PNISRQ8TF01 805 aaKnown RBP8.2□□□□□ -1.1
TPM4-203ENST00000586193 CHTF18Q8WVB6 975 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 LRGUKQ96M69 825 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 PRDM14Q9GZV8 571 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 PPCSQ9HAB8 311 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 PIDD1Q9HB75 910 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 COQ6Q9Y2Z9 468 aa8.2□□□□□ -1.1
TPM4-203ENST00000586193 HMGB1P1B2RPK0 211 aaPredicted RBP8.19□□□□□ -1.1
TPM4-203ENST00000586193 ULK1O75385 1050 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 DEAF1O75398 565 aaPredicted RBP8.19□□□□□ -1.1
TPM4-203ENST00000586193 LRIG2O94898 1065 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 SRGAP2CP0DJJ0 459 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 ADH5P11766 374 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 NAT1P18440 290 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 RECQLP46063 649 aaPredicted RBP8.19□□□□□ -1.1
TPM4-203ENST00000586193 SCRN1Q12765 414 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 GRM3Q14832 879 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 COBLL1Q53SF7 1204 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 NUTM2GQ5VZR2 741 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 EPM2AIP1Q7L775 607 aaPredicted RBP8.19□□□□□ -1.1
TPM4-203ENST00000586193 PNMA8AQ86V59 439 aaPredicted RBP8.19□□□□□ -1.1
TPM4-203ENST00000586193 C11orf74Q86VG3 221 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 IFNL3Q8IZI9 196 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 GOLGA6L1Q8N7Z2 621 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 FAXDC2Q96IV6 333 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 CABP5Q9NP86 173 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 ANLNQ9NQW6 1124 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 MBIPQ9NS73 344 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 RCAN3Q9UKA8 241 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 GIT1Q9Y2X7 761 aa8.19□□□□□ -1.1
TPM4-203ENST00000586193 KRBA1A5PL33 1030 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 GFRA3O60609 400 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 EPXP11678 715 aa8.18□□□□□ -1.1
TPM4-203ENST00000586193 DRD2P14416 443 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms