RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RHBDL3P58872 404 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 GPATCH4Q5T3I0 446 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 POLD1P28340 1107 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 CDC25BP30305 580 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 NAA30Q147X3 362 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 GALNT17Q6IS24 598 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 DRC1Q96MC2 740 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 NOC4LQ9BVI4 516 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 MEIS1O00470 390 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 PPP4R3BQ5MIZ7 849 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 ARMCX5Q6P1M9 558 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 NHSL1Q5SYE7 1610 aa13.95□□□□□ -0.18
SMARCA4-208ENST00000585799 DDTLA6NHG4 134 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 LUC7L2Q9Y383 392 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.181e-8■■■■□ 21.6
SMARCA4-208ENST00000585799 F5H6K3 240 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 HOXA10P31260 410 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 CASP14P31944 242 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 KLRC3Q07444 240 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 QRICH1Q2TAL8 776 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 FBXO41Q8TF61 875 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 KIAA1024Q9UPX6 916 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 AHDC1Q5TGY3 1603 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 CCDC175P0C221 793 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 FUT2Q10981 343 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 CRY2Q49AN0 593 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 VSTM4Q8IW00 320 aa13.94□□□□□ -0.18
SMARCA4-208ENST00000585799 PRCPP42785 496 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 ZNF569Q5MCW4 686 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 ZNF397Q8NF99 534 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 ERMNQ8TAM6 284 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 PRMT6Q96LA8 375 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 BMP3P12645 472 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 RRP9O43818 475 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 RBL2Q08999 1139 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 SH3GLB2Q9NR46 395 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 ZNF215Q9UL58 517 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 TAF1P21675 1872 aa13.93□□□□□ -0.18
SMARCA4-208ENST00000585799 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 COPB1P53618 953 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 ARL6IP4Q66PJ3 421 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 SPZ1Q9BXG8 430 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 AMNQ9BXJ7 453 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 FAM207AQ9NSI2 230 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 ARHGAP6O43182 974 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 SLU7O95391 586 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 NCAPHQ15003 741 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 PPP1R13BQ96KQ4 1090 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 AKR1B10O60218 316 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■■□□ 14.6
SMARCA4-208ENST00000585799 STRIP1Q5VSL9 837 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 CNNM4Q6P4Q7 775 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 NSMFQ6X4W1 530 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 FAM114A1Q8IWE2 563 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 SEPT11Q9NVA2 429 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-208ENST00000585799 BICDL2A1A5D9 508 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 ZBTB5O15062 677 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 STAT3P40763 770 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 SPA17Q15506 151 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 CRACR2AQ9BSW2 395 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 ARGLU1Q9NWB6 273 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 SOWAHDA6NJG2 315 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 B4DLN1 442 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 SORBS3O60504 671 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 FCER1AP12319 257 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 BMP6P22004 513 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 KRT31Q15323 416 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 LARP4BQ92615 738 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 CARD6Q9BX69 1037 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 PDGFDQ9GZP0 370 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 PODXL2Q9NZ53 605 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms