RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 GDAP1L1Q96MZ0 367 aa8□□□□□ -1.13
CDH8-214ENST00000585315 ERVV-2B6SEH9 535 aa8□□□□□ -1.13
CDH8-214ENST00000585315 GARSP41250 739 aaKnown RBP8□□□□□ -1.13
CDH8-214ENST00000585315 KPNA2P52292 529 aaKnown RBP8□□□□□ -1.13
CDH8-214ENST00000585315 PTK2Q05397 1052 aa8□□□□□ -1.13
CDH8-214ENST00000585315 ADAM9Q13443 819 aa8□□□□□ -1.13
CDH8-214ENST00000585315 CCDC124Q96CT7 223 aaKnown RBP8□□□□□ -1.13
CDH8-214ENST00000585315 SEC23IPQ9Y6Y8 1000 aaKnown RBP8□□□□□ -1.13
CDH8-214ENST00000585315 PDE6AP16499 860 aa8□□□□□ -1.13
CDH8-214ENST00000585315 NR1H3Q13133 447 aa8□□□□□ -1.13
CDH8-214ENST00000585315 PTGDRQ13258 359 aa8□□□□□ -1.13
CDH8-214ENST00000585315 GAS2L3Q86XJ1 694 aa8□□□□□ -1.13
CDH8-214ENST00000585315 EAF2Q96CJ1 260 aaPredicted RBP8□□□□□ -1.13
CDH8-214ENST00000585315 ANTXR1Q9H6X2 564 aa8□□□□□ -1.13
CDH8-214ENST00000585315 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
CDH8-214ENST00000585315 PDIA3P30101 505 aaKnown RBP8□□□□□ -1.13
CDH8-214ENST00000585315 EIF4A1P60842 406 aaKnown RBP8□□□□□ -1.13
CDH8-214ENST00000585315 PPP4R3CPQ6ZMV5 832 aa8□□□□□ -1.13
CDH8-214ENST00000585315 RPAINQ86UA6 219 aa8□□□□□ -1.13
CDH8-214ENST00000585315 PNMA1Q8ND90 353 aa8□□□□□ -1.13
CDH8-214ENST00000585315 MYOM2P54296 1465 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 GAP43P17677 238 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ZKSCAN8Q15776 578 aaPredicted RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 CDC37Q16543 378 aaPredicted RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 CACTINQ8WUQ7 758 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 TTC4O95801 387 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 INHBAP08476 426 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 EHHADHQ08426 723 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 PRR16Q569H4 304 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ARL6IP4Q66PJ3 421 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 NEK9Q8TD19 979 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH8-214ENST00000585315 TNKSO95271 1327 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 KIAA0556O60303 1618 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 CHMP2AO43633 222 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 FGAP02671 866 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ABCB4P21439 1286 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 CASP14P31944 242 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 MMS22LQ6ZRQ5 1243 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 SCYL3Q8IZE3 742 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 IFNL3Q8IZI9 196 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 RIOK1Q9BRS2 568 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 IPO11Q9UI26 975 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 SPATA31E1Q6ZUB1 1445 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 A0A0D9SFI3 127 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 CHUKO15111 745 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 WDR46O15213 610 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 HEXIM1O94992 359 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 MYCNP04198 464 aaPredicted RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 MAGEA9P43362 315 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 BFSP1Q12934 665 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 TNFAIP1Q13829 316 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 PDCD2Q16342 344 aaPredicted RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 NRBF2Q96F24 287 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 USTQ9Y2C2 406 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 CARMIL3Q8ND23 1372 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ATP10DQ9P241 1426 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 PSMD2Q13200 908 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 TCIRG1Q13488 830 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 MAGOHBQ96A72 148 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 LRRC59Q96AG4 307 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 HESX1Q9UBX0 185 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 AATKQ6ZMQ8 1374 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 CIAO1O76071 339 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 LMNAP02545 664 aaKnown RBP7.99□□□□□ -1.13
CDH8-214ENST00000585315 FMO2Q99518 471 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 PSTPIP2Q9H939 334 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ZNF148Q9UQR1 794 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ASXL2Q76L83 1435 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ANO9A1A5B4 782 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 TAF5LO75529 589 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 UFL1O94874 794 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 IFNAR1P17181 557 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ERCC3P19447 782 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ZAP70P43403 619 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 RAD51AP2Q09MP3 1159 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ANKRD20A4Q4UJ75 823 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ANKRD20A8PQ5CZ79 823 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ANKRD20A2Q5SQ80 823 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 ANKRD20A1Q5TYW2 823 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 RINT1Q6NUQ1 792 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 VSTM4Q8IW00 320 aa7.99□□□□□ -1.13
CDH8-214ENST00000585315 HARSP12081 509 aaKnown RBP7.98□□□□□ -1.13
CDH8-214ENST00000585315 LIFRP42702 1097 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 LRRC63Q05C16 580 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 PPP2R5AQ15172 486 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 TMTC3Q6ZXV5 915 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 ZBTB8OSQ8IWT0 167 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 NELFCDQ8IXH7 590 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 SLC35F6Q8N357 371 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 CCDC17Q96LX7 622 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 EIF2AQ9BY44 585 aaKnown RBP7.98□□□□□ -1.13
CDH8-214ENST00000585315 FAM96AQ9H5X1 160 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 AATFQ9NY61 560 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDH8-214ENST00000585315 GOLGA4Q13439 2230 aaKnown RBP7.98□□□□□ -1.13
CDH8-214ENST00000585315 SMIM24O75264 130 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 GPC4O75487 556 aa7.98□□□□□ -1.13
CDH8-214ENST00000585315 ADD1P35611 737 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms