RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PDGFCQ9NRA1 345 aa21.71■■□□□ 1.07
TOP3A-220ENST00000585031 SLC4A4Q9Y6R1 1079 aa21.71■■□□□ 1.07
TOP3A-220ENST00000585031 GTPBP6O43824 516 aaPredicted RBP21.7■■□□□ 1.06
TOP3A-220ENST00000585031 ZBED4O75132 1171 aa21.7■■□□□ 1.06
TOP3A-220ENST00000585031 CA3P07451 260 aa21.7■■□□□ 1.06
TOP3A-220ENST00000585031 ATP2A2P16615 1042 aaKnown RBP21.7■■□□□ 1.06
TOP3A-220ENST00000585031 SMPD1P17405 629 aa21.7■■□□□ 1.06
TOP3A-220ENST00000585031 FSCN1Q16658 493 aaKnown RBP21.7■■□□□ 1.06
TOP3A-220ENST00000585031 SPRED2Q7Z698 418 aa21.7■■□□□ 1.06
TOP3A-220ENST00000585031 HOMER2Q9NSB8 354 aa21.7■■□□□ 1.06
TOP3A-220ENST00000585031 IGKV6D-41A0A0C4DH26 115 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 ZBBXA8MT70 800 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 TLK2Q86UE8 772 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 CHST13Q8NET6 341 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 HLA-CQ95604 372 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 SEZ6LQ9BYH1 1024 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 CD320Q9NPF0 282 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 CLIP2Q9UDT6 1046 aa21.69■■□□□ 1.06
TOP3A-220ENST00000585031 FAM86C2PA6NEL3 165 aa21.68■■□□□ 1.06
TOP3A-220ENST00000585031 RBAK-RBAKDNI3L0D1 243 aa21.68■■□□□ 1.06
TOP3A-220ENST00000585031 DYNC1LI2O43237 492 aaPredicted RBP21.68■■□□□ 1.06
TOP3A-220ENST00000585031 CABYRO75952 493 aa21.68■■□□□ 1.06
TOP3A-220ENST00000585031 TMEM67Q5HYA8 995 aa21.68■■□□□ 1.06
TOP3A-220ENST00000585031 NOL8Q76FK4 1167 aaKnown RBP21.68■■□□□ 1.06
TOP3A-220ENST00000585031 WDFY4Q6ZS81 3184 aa21.67■■□□□ 1.06
TOP3A-220ENST00000585031 ZNF536O15090 1300 aa21.67■■□□□ 1.06
TOP3A-220ENST00000585031 CYP2C9P11712 490 aa21.67■■□□□ 1.06
TOP3A-220ENST00000585031 TAPT1Q6NXT6 567 aa21.67■■□□□ 1.06
TOP3A-220ENST00000585031 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
TOP3A-220ENST00000585031 A1CFQ9NQ94 594 aaKnown RBP21.67■■□□□ 1.06
TOP3A-220ENST00000585031 TRMT13Q9NUP7 481 aaKnown RBP21.67■■□□□ 1.06
TOP3A-220ENST00000585031 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
TOP3A-220ENST00000585031 UBE3CQ15386 1083 aa21.66■■□□□ 1.06
TOP3A-220ENST00000585031 DEFB128Q7Z7B8 93 aa21.66■■□□□ 1.06
TOP3A-220ENST00000585031 SIRT2Q8IXJ6 389 aa21.66■■□□□ 1.06
TOP3A-220ENST00000585031 AMOTL1Q8IY63 956 aa21.66■■□□□ 1.06
TOP3A-220ENST00000585031 CLASRPQ8N2M8 674 aaKnown RBP21.66■■□□□ 1.06
TOP3A-220ENST00000585031 ALDH8A1Q9H2A2 487 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-220ENST00000585031 FBXO40Q9UH90 709 aa21.66■■□□□ 1.06
TOP3A-220ENST00000585031 COL4A4P53420 1690 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-220ENST00000585031 GSG1L2A8MUP6 293 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 ATP5JP18859 108 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 TAP1Q03518 808 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 LRRC47Q8N1G4 583 aaKnown RBP21.65■■□□□ 1.06
TOP3A-220ENST00000585031 PPP1R13LQ8WUF5 828 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 MKL1Q969V6 931 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 PURBQ96QR8 312 aaKnown RBP21.65■■□□□ 1.06
TOP3A-220ENST00000585031 HAUS7Q99871 368 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 FEM1BQ9UK73 627 aa21.65■■□□□ 1.06
TOP3A-220ENST00000585031 TRIP12Q14669 1992 aaPredicted RBP21.65■■□□□ 1.06
TOP3A-220ENST00000585031 LPXNO60711 386 aa21.64■■□□□ 1.05
TOP3A-220ENST00000585031 SBK1Q52WX2 424 aa21.64■■□□□ 1.05
TOP3A-220ENST00000585031 EEPD1Q7L9B9 569 aa21.64■■□□□ 1.05
TOP3A-220ENST00000585031 FBXO16Q8IX29 292 aaPredicted RBP21.64■■□□□ 1.05
TOP3A-220ENST00000585031 KIF1BPQ96EK5 621 aa21.64■■□□□ 1.05
TOP3A-220ENST00000585031 CEP95Q96GE4 821 aa21.64■■□□□ 1.05
TOP3A-220ENST00000585031 STRBPQ96SI9 672 aaKnown RBP21.64■■□□□ 1.05
TOP3A-220ENST00000585031 AP5M1Q9H0R1 490 aa21.64■■□□□ 1.05
TOP3A-220ENST00000585031 CTDP1Q9Y5B0 961 aaPredicted RBP21.64■■□□□ 1.05
TOP3A-220ENST00000585031 PRR33A8MZF0 331 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 PRDM1O75626 825 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 PFKMP08237 780 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 OAZ1P54368 228 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 HSP90AB4PQ58FF6 505 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 PANK1Q8TE04 598 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 ARNTL2Q8WYA1 636 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 CHMP4CQ96CF2 233 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 ACAD9Q9H845 621 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 MKNK2Q9HBH9 465 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 ARPP21Q9UBL0 812 aaPredicted RBP21.63■■□□□ 1.05
TOP3A-220ENST00000585031 SCN10AQ9Y5Y9 1956 aa21.63■■□□□ 1.05
TOP3A-220ENST00000585031 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 MRE11P49959 708 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 SNAP25P60880 206 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 GRB10Q13322 594 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 PHOSPHO2Q8TCD6 241 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.62■■□□□ 1.05
TOP3A-220ENST00000585031 RNF146Q9NTX7 359 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 MTMR4Q9NYA4 1195 aa21.62■■□□□ 1.05
TOP3A-220ENST00000585031 TANC1Q9C0D5 1861 aa21.61■■□□□ 1.05
TOP3A-220ENST00000585031 ASB14A6NK59 587 aa21.61■■□□□ 1.05
TOP3A-220ENST00000585031 MUM1L1Q5H9M0 696 aa21.61■■□□□ 1.05
TOP3A-220ENST00000585031 IQSEC1Q6DN90 963 aa21.61■■□□□ 1.05
TOP3A-220ENST00000585031 DDRGK1Q96HY6 314 aa21.61■■□□□ 1.05
TOP3A-220ENST00000585031 EPB41L4AQ9HCS5 686 aaPredicted RBP21.61■■□□□ 1.05
TOP3A-220ENST00000585031 TNKSO95271 1327 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 TMEM232C9JQI7 657 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 BMP3P12645 472 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 SLFN13Q68D06 897 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 GMCL1P1Q8NEA9 526 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 TRERF1Q96PN7 1200 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 COG6Q9Y2V7 657 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 Q9Y3F1 56 aa21.6■■□□□ 1.05
TOP3A-220ENST00000585031 ZEB2O60315 1214 aa21.59■■□□□ 1.05
TOP3A-220ENST00000585031 RASGRP2Q7LDG7 609 aa21.59■■□□□ 1.05
TOP3A-220ENST00000585031 SNX27Q96L92 541 aa21.59■■□□□ 1.05
TOP3A-220ENST00000585031 SLC9A7Q96T83 725 aa21.59■■□□□ 1.05
TOP3A-220ENST00000585031 TRIOO75962 3097 aa21.59■■□□□ 1.05
TOP3A-220ENST00000585031 LCHNA4D1U4 455 aa21.58■■□□□ 1.05
TOP3A-220ENST00000585031 PURAQ00577 322 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms