RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TAF6LQ9Y6J9 622 aa6.1□□□□□ -1.43
PPP4R1-227ENST00000583988 FADS2P1A8MWK0 482 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 U2SURPO15042 1029 aaKnown RBP6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 DDAH1O94760 285 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 GSNP06396 782 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 GSTM1P09488 218 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 ITGA4P13612 1032 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 ENDOUP21128 410 aaKnown RBP6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 HSF5Q4G112 596 aaPredicted RBP6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 CELF2-AS1Q8N7Q2 184 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 ZNF513Q8N8E2 541 aaPredicted RBP6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 NAT16Q8N8M0 369 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 RCC1LQ96I51 464 aaKnown RBP6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 TRIM55Q9BYV6 548 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 IRF2BPLQ9H1B7 796 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 CRTAC1Q9NQ79 661 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 WHRNQ9P202 907 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 USP35Q9P2H5 1018 aa6.09□□□□□ -1.43
PPP4R1-227ENST00000583988 TEX51A0A1B0GUA7 166 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 WTIPA6NIX2 430 aaPredicted RBP6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 H0Y8X5 98 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 SEMA7AO75326 666 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 PPM1BO75688 479 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 GJB6O95452 261 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 NAT2P11245 290 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 PNLIPP16233 465 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 PRKCAP17252 672 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 SRSF3P84103 164 aaKnown RBP6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 GALNT18Q6P9A2 607 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 ADAT2Q7Z6V5 191 aaKnown RBP6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 ARHGEF39Q8N4T4 335 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 ZNF669Q96BR6 464 aaPredicted RBP6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 APBA2Q99767 749 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 GBP3Q9H0R5 595 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 EPN3Q9H201 632 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 ST7Q9NRC1 585 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
PPP4R1-227ENST00000583988 ARL4AP40617 200 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 SERINC3Q13530 473 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 NFE2L2Q16236 605 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 DDR2Q16832 855 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 FIBCD1Q8N539 461 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 NUP43Q8NFH3 380 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 FGD4Q96M96 766 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 SLC12A9Q9BXP2 914 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 SIRT5Q9NXA8 310 aa6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 CNOT6Q9ULM6 557 aaKnown RBP6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 SF3B6Q9Y3B4 125 aaKnown RBP6.07□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQ27 194 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQ64 194 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQC6 194 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQD8 194 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 NOP2P46087 812 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 CYP4F8P98187 520 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 RTP2Q5QGT7 225 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 MRM1Q6IN84 353 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 EEPD1Q7L9B9 569 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 SLCO6A1Q86UG4 719 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 SIAH1Q8IUQ4 282 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 OSBPL2Q9H1P3 480 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 NOL6Q9H6R4 1146 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 GCM1Q9NP62 436 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 IMPACTQ9P2X3 320 aa6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 ARID1BQ8NFD5 2236 aaPredicted RBP6.06□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQ45 241 aaPredicted RBP6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQY0 241 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 NUDT19A8MXV4 375 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 B2RBV5 119 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 MPOP05164 745 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 VIPR1P32241 457 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 PPP2R5DQ14738 602 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 JAMLQ86YT9 394 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 TMEM52Q8NDY8 209 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 ST13P5Q8NFI4 369 aaPredicted RBP6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 ZDHHC15Q96MV8 337 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 JMJD8Q96S16 334 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 APEX2Q9UBZ4 518 aa6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 MBD1Q9UIS9 605 aaPredicted RBP6.05□□□□□ -1.44
PPP4R1-227ENST00000583988 SUSD5O60279 629 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 CD3EP07766 207 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 CEBPAP49715 358 aaPredicted RBP6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 POU4F1Q01851 419 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 LAPTM5Q13571 262 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 SSPNQ14714 243 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 RAB3GAP1Q15042 981 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 BVESQ8NE79 360 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 ADCY4Q8NFM4 1077 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 FCRL3Q96P31 734 aaPredicted RBP6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 DNAJC2Q99543 621 aaKnown RBP6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 LNPKQ9C0E8 428 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 CGGBP1Q9UFW8 167 aaPredicted RBP6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 AKT3Q9Y243 479 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 EMC9Q9Y3B6 208 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 KCTD3Q9Y597 815 aa6.04□□□□□ -1.44
PPP4R1-227ENST00000583988 IFNGR1P15260 489 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 EPHB3P54753 998 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 ERVFRD-1P60508 538 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 GRB10Q13322 594 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms