RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-216ENST00000583804 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-216ENST00000583804 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-216ENST00000583804 GPKOWQ92917 476 aaPredicted RBP eCLIP12.63□□□□□ -0.39
TOP3A-216ENST00000583804 TRERF1Q96PN7 1200 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 MOV10L1Q9BXT6 1211 aaKnown RBP12.63□□□□□ -0.39
TOP3A-216ENST00000583804 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 THSD7BQ9C0I4 1608 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 SLC25A27O95847 323 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 DEKP35659 375 aaKnown RBP12.62□□□□□ -0.39
TOP3A-216ENST00000583804 HMGN5P82970 282 aaKnown RBP12.62□□□□□ -0.39
TOP3A-216ENST00000583804 PKN1Q16512 942 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 SMARCC2Q8TAQ2 1214 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 WASF1Q92558 559 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 CFHR5Q9BXR6 569 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 RNF146Q9NTX7 359 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
TOP3A-216ENST00000583804 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
TOP3A-216ENST00000583804 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
TOP3A-216ENST00000583804 ERCC3P19447 782 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 NAPAP54920 295 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
TOP3A-216ENST00000583804 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 PORCNQ9H237 461 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 MROH8Q9H579 483 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 EFCC1Q9HA90 598 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 ABCB11O95342 1321 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 PARP14Q460N5 1801 aa12.61□□□□□ -0.39
TOP3A-216ENST00000583804 GPR25O00155 361 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 STXBP3O00186 592 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 COPB2P35606 906 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 DDIT3P35638 169 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 SP3Q02447 781 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 CHMP5Q9NZZ3 219 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
TOP3A-216ENST00000583804 H3BQV1 296 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 XBP1P17861 261 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 SYT1P21579 422 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 MAPK4P31152 587 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 KIF22Q14807 665 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 ANKRD35Q8N283 1001 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-216ENST00000583804 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-216ENST00000583804 ACAD9Q9H845 621 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 FBXO40Q9UH90 709 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-216ENST00000583804 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 NFIBO00712 420 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 STX6O43752 255 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 NLRP5P59047 1200 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 LACTBP83111 547 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-216ENST00000583804 TRIM29Q14134 588 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 MCTP1Q6DN14 999 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 C8orf76Q96K31 380 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 MMP19Q99542 508 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 ZDHHC9Q9Y397 364 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 IVNS1ABPQ9Y6Y0 642 aa12.59□□□□□ -0.39
TOP3A-216ENST00000583804 MYH6P13533 1939 aa12.58□□□□□ -0.39
TOP3A-216ENST00000583804 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
TOP3A-216ENST00000583804 FKTNO75072 461 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 CFBP00751 764 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 FCER1AP12319 257 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 PSMC4P43686 418 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 MRPL12P52815 198 aaKnown RBP12.58□□□□□ -0.4
TOP3A-216ENST00000583804 FCGRTP55899 365 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 KCTD2Q14681 263 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 GPR142Q7Z601 462 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 PLEKHH3Q7Z736 793 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 CCDC148Q8NFR7 591 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 ZNF296Q8WUU4 475 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-216ENST00000583804 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 KCNJ14Q9UNX9 436 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms