RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 TOB1P50616 345 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CPXCR1Q8N123 301 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TMEM87AQ8NBN3 555 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 LEO1Q8WVC0 666 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 AGBL1Q96MI9 1066 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 LMBRD1Q9NUN5 540 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 POLR3EQ9NVU0 708 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 RTEL1Q9NZ71 1219 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 NOL7Q9UMY1 257 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 AGTPBP1Q9UPW5 1226 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CLIC4Q9Y696 253 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 RLFQ13129 1914 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ZNF536O15090 1300 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 MYPNQ86TC9 1320 aa15.84■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ATP2B1P20020 1258 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PTMSP20962 102 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 HOXA7P31268 230 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MKRN3Q13064 507 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MOGSQ13724 837 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 UBE2SQ16763 222 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 JAKMIP3Q5VZ66 844 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ANO1Q5XXA6 986 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 KRT25Q7Z3Z0 450 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TMEM260Q9NX78 707 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ADAMTS5Q9UNA0 930 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MRPL11Q9Y3B7 192 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SMCHD1A6NHR9 2005 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ABCB11O95342 1321 aa15.83■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SPDYE16A6NNV3 312 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 GTF2A2P52657 109 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 IRX3P78415 501 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SPRYD7Q5W111 196 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 STK38Q15208 465 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 NONOQ15233 471 aaKnown RBP eCLIP15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SF3A1Q15459 793 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 RCOR1Q9UKL0 485 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PCDHB6Q9Y5E3 794 aa15.82■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ELP1O95163 1332 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 OPLAHO14841 1288 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 YEATS4O95619 227 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CETPP11597 493 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ALAS1P13196 640 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TRAPPC10P48553 1259 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 OAZ1P54368 228 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PABPC4Q13310 644 aaKnown RBP eCLIP15.81■□□□□ 0.122e-7■■■□□ 15.2
CDK5RAP3-219ENST00000580670 INF2Q27J81 1249 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 GPAT2Q6NUI2 795 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 LINC00301Q8NCQ3 95 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 REPS2Q8NFH8 660 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MS4A4AQ96JQ5 239 aa15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ASCC2Q9H1I8 757 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MEIS2O14770 477 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TOMM70O94826 608 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TTC38Q5R3I4 469 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SAPCD2Q86UD0 394 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 P2RX7Q99572 595 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 COL11A1P12107 1806 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CCL15-CCL14A0A0B4J2E2 113 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 GADD45BO75293 160 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 OSBPP22059 807 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 YY1P25490 414 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TMEM132BQ14DG7 1078 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CCL15Q16663 113 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TPRNQ4KMQ1 711 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 HOMER2Q9NSB8 354 aa15.8■□□□□ 0.12
CDK5RAP3-219ENST00000580670 GCOM1H8Y6P7 765 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PIK3CDO00329 1044 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 WNT7AO00755 349 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ATP2A1O14983 1001 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SPTLC2O15270 562 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CFBP00751 764 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 POLR2MP0CAP2 368 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 HOXA13P31271 388 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PLS1Q14651 629 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SLC39A14Q15043 492 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 PTPAQ15257 358 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ZNF174Q15697 407 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 SNRNP48Q6IEG0 339 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 RASAL3Q86YV0 1011 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TEX2Q8IWB9 1127 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MB21D1Q8N884 522 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 KCNG4Q8TDN1 519 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 TBCKQ8TEA7 893 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ZNF214Q9UL59 606 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
CDK5RAP3-219ENST00000580670 ME1P48163 572 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 UBE2HP62256 183 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 HERVK_113P62684 666 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
CDK5RAP3-219ENST00000580670 MCTP2Q6DN12 878 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms