RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
TRAF4-214ENST00000580073 MYADML2A6NDP7 307 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 NEFLP07196 543 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 ALAS1P13196 640 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 PLEKHM2Q8IWE5 1019 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 FAM126BQ8IXS8 530 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 FGD4Q96M96 766 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 TRERF1Q96PN7 1200 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-214ENST00000580073 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
TRAF4-214ENST00000580073 Q9Y3F1 56 aa15.79■□□□□ 0.12
TRAF4-214ENST00000580073 MYO9BQ13459 2157 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 CDK7P50613 346 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 PDE1AP54750 535 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 RAB30Q15771 203 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 CCDC96Q2M329 555 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 RCSD1Q6JBY9 416 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 TICAM2Q86XR7 235 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 VTA1Q9NP79 307 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 CCPG1Q9ULG6 757 aa15.78■□□□□ 0.12
TRAF4-214ENST00000580073 CDH23Q9H251 3354 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 RAD50Q92878 1312 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 RANBP6O60518 1105 aaKnown RBP15.77■□□□□ 0.12
TRAF4-214ENST00000580073 MCCP23508 829 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 EPHB4P54760 987 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 FSCN1Q16658 493 aaKnown RBP15.77■□□□□ 0.12
TRAF4-214ENST00000580073 EVI5LQ96CN4 794 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.77■□□□□ 0.122e-8■■■□□ 15.1
TRAF4-214ENST00000580073 KATNBL1Q9H079 304 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
TRAF4-214ENST00000580073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAF4-214ENST00000580073 A0A0C4DFX4 3053 aa15.77■□□□□ 0.11
TRAF4-214ENST00000580073 KIAA1217Q5T5P2 1943 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 ZNF536O15090 1300 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 ADCY6O43306 1168 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 ORC4O43929 436 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 ICAM1P05362 532 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 PCP11498 1178 aaKnown RBP15.76■□□□□ 0.11
TRAF4-214ENST00000580073 CNTN2Q02246 1040 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 BRDTQ58F21 947 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-214ENST00000580073 IQSEC1Q6DN90 963 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 KCTD1Q719H9 257 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 AGBL1Q96MI9 1066 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 SEC62Q99442 399 aaKnown RBP15.76■□□□□ 0.11
TRAF4-214ENST00000580073 PPP1R12CQ9BZL4 782 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 HIPK3Q9H422 1215 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 IL23AQ9NPF7 189 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 TOMM22Q9NS69 142 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 CYP39A1Q9NYL5 469 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 MSRAQ9UJ68 235 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 ANAPC4Q9UJX5 808 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 PRR12Q9ULL5 1215 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
TRAF4-214ENST00000580073 SCN10AQ9Y5Y9 1956 aa15.76■□□□□ 0.11
TRAF4-214ENST00000580073 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 B4DLN1 442 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 NT5C2P49902 561 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 MRPL12P52815 198 aaKnown RBP15.75■□□□□ 0.11
TRAF4-214ENST00000580073 ITGA7Q13683 1181 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 TMEM240Q5SV17 173 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 NSMFQ6X4W1 530 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 HELLSQ9NRZ9 838 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 EYSQ5T1H1 3165 aa15.75■□□□□ 0.11
TRAF4-214ENST00000580073 CD4P01730 458 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 PFKMP08237 780 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 CSF2RAP15509 400 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 CPT1AP50416 773 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 MFAP1P55081 439 aaKnown RBP15.74■□□□□ 0.11
TRAF4-214ENST00000580073 BEX3Q00994 111 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 CXCL17Q6UXB2 119 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 FBXO16Q8IX29 292 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-214ENST00000580073 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
TRAF4-214ENST00000580073 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 RANBP17Q9H2T7 1088 aaKnown RBP15.74■□□□□ 0.11
TRAF4-214ENST00000580073 POLR3EQ9NVU0 708 aa15.74■□□□□ 0.11
TRAF4-214ENST00000580073 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-214ENST00000580073 SOWAHBA6NEL2 793 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 CTAGE5O15320 804 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 SUPT20HL2P0C7V6 817 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 TOP1P11387 765 aaKnown RBP15.73■□□□□ 0.11
TRAF4-214ENST00000580073 CTDSPL2Q05D32 466 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 ALX1Q15699 326 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 RASIP1Q5U651 963 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 ERICH6BQ5W0A0 696 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 CENPQQ7L2Z9 268 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-214ENST00000580073 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 HERVK_113Q902F9 699 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 OSBPL3Q9H4L5 887 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 PPP4R2Q9NY27 417 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 MTMR7Q9Y216 660 aa15.73■□□□□ 0.11
TRAF4-214ENST00000580073 SCN5AQ14524 2016 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 NKRFO15226 690 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRAF4-214ENST00000580073 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-214ENST00000580073 NOVP48745 357 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 ALDH5A1P51649 535 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-214ENST00000580073 GRIN2CQ14957 1233 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms