RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 URI1O94763 535 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TTLL1O95922 423 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GYPCP04921 128 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 EEF1GP26641 437 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CASP14P31944 242 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SHMT1P34896 483 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GNG11P61952 73 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 AMPD3Q01432 767 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CDC42EP5Q6NZY7 148 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 RAD9BQ6WBX8 426 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PROM2Q8N271 834 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GIMAP8Q8ND71 665 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LRRC15Q8TF66 581 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CALML4Q96GE6 196 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PLIN2Q99541 437 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TMX4Q9H1E5 349 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 EHD4Q9H223 541 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 VPS16Q9H269 839 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GPCPD1Q9NPB8 672 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 EXOC1Q9NV70 894 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TMEM260Q9NX78 707 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■□□□□ 10.2
CDK5RAP3-208ENST00000578525 SERPINB13Q9UIV8 391 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 BAZ2BQ9UIF8 2168 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PNMA6FA0A0J9YX94 578 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 BICDL2A1A5D9 508 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LGALS16A8MUM7 142 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 G3V3G9 751 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CCNE1P24864 410 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 HOXA7P31268 230 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FXR1P51114 621 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FXR2P51116 673 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FKBP1AP62942 108 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ASIC1P78348 528 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PDE4DQ08499 809 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MTF1Q14872 753 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CALCRLQ16602 461 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TMEM266Q2M3C6 531 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 COBLL1Q53SF7 1204 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TTI2Q6NXR4 508 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 COL23A1Q86Y22 540 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 IRF2BP1Q8IU81 584 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TMTC1Q8IUR5 882 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FLAD1Q8NFF5 587 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CPLX3Q8WVH0 158 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 COA7Q96BR5 231 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MASTLQ96GX5 879 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CCDC17Q96LX7 622 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MTMR9Q96QG7 549 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DESI2Q9BSY9 194 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MMTAG2Q9BU76 263 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TRIM9Q9C026 710 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MRPL44Q9H9J2 332 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 RIC8AQ9NPQ8 531 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 OGFRQ9NZT2 677 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MAGEC2Q9UBF1 373 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 STK17AQ9UEE5 414 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PARP3Q9Y6F1 533 aa10.49□□□□□ -0.73
CDK5RAP3-208ENST00000578525 A0A1W2PQC6 194 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FANCGO15287 622 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TADA3O75528 432 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TECP42680 631 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CRKP46108 304 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SCNN1DP51172 638 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PMS1P54277 932 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 EIF6P56537 245 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 UBXN1Q04323 297 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GRB10Q13322 594 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CCDC96Q2M329 555 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GPATCH4Q5T3I0 446 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 APOBEC3HQ6NTF7 200 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CLEC10AQ8IUN9 316 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FAM114A1Q8IWE2 563 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SMAP1Q8IYB5 467 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MB21D1Q8N884 522 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LRRN4CLQ8ND94 238 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 P2RX5Q93086 422 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 KIFC2Q96AC6 838 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 WDR24Q96S15 920 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 NAP1L4Q99733 375 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MXD3Q9BW11 206 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CARD6Q9BX69 1037 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 JMJD4Q9H9V9 463 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ABHD10Q9NUJ1 306 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MAPK8IP1Q9UQF2 711 aa10.48□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SIPA1L1O43166 1804 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MPHOSPH10O00566 681 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 H2AFXP16104 143 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TXKP42681 527 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms