RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 AACSQ86V21 672 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 FTSJ3Q8IY81 847 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 SPICE1Q8N0Z3 855 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 MMP19Q99542 508 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 XPNPEP3Q9NQH7 507 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 PDLIM7Q9NR12 457 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 DOCK3Q8IZD9 2030 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 PTPRFP10586 1907 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 ALPK3Q96L96 1907 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 PQBP1O60828 265 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 SLC25A27O95847 323 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 PGK1P00558 417 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 CLTBP09497 229 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 TTF1Q15361 905 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 TMED8Q6PL24 325 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 TMEM179Q6ZVK1 233 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 ITPRIPQ8IWB1 547 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 ABRAQ8N0Z2 381 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 GPR161Q8N6U8 529 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 VTI1AQ96AJ9 217 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 ATG4CQ96DT6 458 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 MAML3Q96JK9 1138 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 RIOK1Q9BRS2 568 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 TTYH1Q9H313 450 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 NOP58Q9Y2X3 529 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-212ENST00000577721 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.08
SMARCE1-212ENST00000577721 PLXNB2O15031 1838 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 IGHA2P01877 340 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 PGK2P07205 417 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 CYP2D6P10635 497 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 BMP2P12643 396 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 ICA1Q05084 483 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 FPGSQ05932 587 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 GABPAQ06546 454 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 KCTD2Q14681 263 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 SNX17Q15036 470 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 KIAA1755Q5JYT7 1200 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 ERC1Q8IUD2 1116 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 AMOTL1Q8IY63 956 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 SLC44A5Q8NCS7 719 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 SDR42E1Q8WUS8 393 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 PPM1EQ8WY54 764 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 DYNLL2Q96FJ2 89 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 DNAJC2Q99543 621 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 IL1RAPL2Q9NP60 686 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 SWAP70Q9UH65 585 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 PHF24Q9UPV7 400 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 EXOC6BQ9Y2D4 811 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 ZNF532Q9HCE3 1301 aa8.27□□□□□ -1.09
SMARCE1-212ENST00000577721 APBB1O00213 710 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 GOLIM4O00461 696 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 KIAA0355O15063 1070 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 AKR1A1P14550 325 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 AKR1B1P15121 316 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 CD46P15529 392 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 PDE6AP16499 860 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 TAL1P17542 331 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 ITGB8P26012 769 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 STAT3P40763 770 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 EPHB4P54760 987 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 GRIN2CQ14957 1233 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 TMEM132BQ14DG7 1078 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 CCDC129Q6ZRS4 1044 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 CLEC10AQ8IUN9 316 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 CCDC17Q96LX7 622 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 TINF2Q9BSI4 451 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 ARMT1Q9H993 441 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 STARD7Q9NQZ5 370 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 NRBP1Q9UHY1 535 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 CNPY2Q9Y2B0 182 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 TMX2Q9Y320 296 aa8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 CTDP1Q9Y5B0 961 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-212ENST00000577721 ATAD5Q96QE3 1844 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 TMEM265A0A087WTH1 108 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 A0A1W2PQ45 241 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 A0A1W2PQY0 241 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 IFIT2P09913 472 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 EEF2P13639 858 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 HSP90AB4PQ58FF6 505 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 RIOX2Q8IUF8 465 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 SIAH1Q8IUQ4 282 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 CLASRPQ8N2M8 674 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 LCORLQ8N3X6 602 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms