RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TMEM60Q9H2L4 133 aa9.52□□□□□ -0.88
RPAIN-215ENST00000575112 BSDC1Q9NW68 430 aaPredicted RBP9.52□□□□□ -0.88
RPAIN-215ENST00000575112 GGA1Q9UJY5 639 aa9.52□□□□□ -0.88
RPAIN-215ENST00000575112 FBXO3Q9UK99 471 aa9.52□□□□□ -0.88
RPAIN-215ENST00000575112 FAM237AA0A1B0GTK4 181 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 PPP1R3GB7ZBB8 358 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 AGPSO00116 658 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 GDF11O95390 407 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 PMS1P54277 932 aaKnown RBP9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CYP4A11Q02928 519 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 RFX7Q2KHR2 1363 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC122Q5T0U0 273 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 LACRTQ9GZZ8 138 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 JRKLQ9Y4A0 524 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 SRPRBQ9Y5M8 271 aaKnown RBP9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CTAGE15A4D2H0 777 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 MEIS1O00470 390 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 LDHCP07864 332 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CTAGE8P0CG41 777 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 FGFR2P21802 821 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CCT5P48643 541 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 AMPD2Q01433 879 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 SLC7A5Q01650 507 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CTAGE6Q86UF2 777 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CTAGE4Q8IX94 777 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.52□□□□□ -0.89
RPAIN-215ENST00000575112 NYXQ9GZU5 481 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 FOXP1Q9H334 677 aaPredicted RBP9.52□□□□□ -0.89
RPAIN-215ENST00000575112 VEZTQ9HBM0 779 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 USP40Q9NVE5 1235 aa9.52□□□□□ -0.89
RPAIN-215ENST00000575112 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
RPAIN-215ENST00000575112 CDHR2Q9BYE9 1310 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 POTEMA6NI47 508 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 KCNJ18B7U540 433 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 DDX39AO00148 427 aaKnown RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 PSMA7O14818 248 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 PRPF6O94906 941 aaKnown RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 C2orf54Q08AI8 447 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TTBK2Q6IQ55 1244 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TMTC3Q6ZXV5 915 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 CABP7Q86V35 215 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 MICALL1Q8N3F8 863 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 FBXL16Q8N461 479 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 CALML4Q96GE6 196 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 MYO6Q9UM54 1294 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TUBB4AP04350 444 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 RPN1P04843 607 aaKnown RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 FCER1AP12319 257 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 HSP90B2PQ58FF3 399 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 ICE2Q659A1 982 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 SGMS1Q86VZ5 419 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TBCKQ8TEA7 893 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 NAPGQ99747 312 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TMEM47Q9BQJ4 181 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 NOC4LQ9BVI4 516 aaKnown RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 RNF26Q9BY78 433 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 PSD3Q9NYI0 1048 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TTC31Q49AM3 519 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 NT5DC1Q5TFE4 455 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 PLA2G12BQ9BX93 195 aa9.51□□□□□ -0.89
RPAIN-215ENST00000575112 CWC15Q9P013 229 aaKnown RBP9.51□□□□□ -0.89
RPAIN-215ENST00000575112 TRAF5O00463 557 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 SERPINB2P05120 415 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 PRCPP42785 496 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC181Q5TID7 509 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 DNAAF5Q86Y56 855 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 SNX29Q8TEQ0 813 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 HNRNPLLQ8WVV9 542 aaKnown RBP9.5□□□□□ -0.89
RPAIN-215ENST00000575112 PANX2Q96RD6 677 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 SH2D3AQ9BRG2 576 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 LRWD1Q9UFC0 647 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 AKAP11Q9UKA4 1901 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 TTC26A0AVF1 554 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L15C9J2P7 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L13C9JLJ4 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L11C9JVI0 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L18D6R9N7 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L22D6RA61 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L17D6RBQ6 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L19D6RCP7 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L20D6RJB6 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP8P40818 1118 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L24Q0WX57 530 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 USP17L6PQ6QN14 398 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 EP400NLQ6ZTU2 488 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 KRT26Q7Z3Y9 468 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 CEP95Q96GE4 821 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 C6orf50Q9HD87 102 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 AGPAT5Q9NUQ2 364 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
RPAIN-215ENST00000575112 HPCAL4Q9UM19 191 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 COL5A2P05997 1499 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-215ENST00000575112 XDHP47989 1333 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 FAM205AQ6ZU69 1335 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms