RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 TMEM63CQ9P1W3 806 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 STX8Q9UNK0 236 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 MGAMO43451 1857 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 A0A1W2PPC1 479 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 MSCO60682 206 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 DEXIO95424 95 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 MBD3O95983 291 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 HOXC6P09630 235 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 COPB2P35606 906 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 ERVK-24P63145 666 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 CEBPZQ03701 1054 aaKnown RBP11.04□□□□□ -0.64
NDE1-208ENST00000573694 COG2Q14746 738 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 ABRAQ8N0Z2 381 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
NDE1-208ENST00000573694 SHCBP1Q8NEM2 672 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 USP28Q96RU2 1077 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 KANSL2Q9H9L4 492 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
NDE1-208ENST00000573694 SLC5A4Q9NY91 659 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 RBPJLQ9UBG7 517 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 CENPFP49454 3210 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 DOCK3Q8IZD9 2030 aa11.04□□□□□ -0.64
NDE1-208ENST00000573694 SLC15A5A6NIM6 579 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
NDE1-208ENST00000573694 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
NDE1-208ENST00000573694 TOP1P11387 765 aaKnown RBP11.03□□□□□ -0.64
NDE1-208ENST00000573694 DEKP35659 375 aaKnown RBP11.03□□□□□ -0.64
NDE1-208ENST00000573694 RGS2P41220 211 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 NOVP48745 357 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 UBE2HP62256 183 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 TRIM29Q14134 588 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 CSPP1Q1MSJ5 1256 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 U2AF1L4Q8WU68 220 aaKnown RBP11.03□□□□□ -0.64
NDE1-208ENST00000573694 PIBF1Q8WXW3 757 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 WASF1Q92558 559 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 USP6NLQ92738 828 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 SPATA32Q96LK8 384 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 FEZ1Q99689 392 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 ARHGEF10LQ9HCE6 1279 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 MTMR4Q9NYA4 1195 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 VPS54Q9P1Q0 977 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 ELP1O95163 1332 aa11.03□□□□□ -0.64
NDE1-208ENST00000573694 GDF11O95390 407 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 MMP1P03956 469 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 INHAP05111 366 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 FDX1P10109 184 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 KIF5BP33176 963 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 AKAP17AQ02040 695 aaKnown RBP11.02□□□□□ -0.65
NDE1-208ENST00000573694 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 PLEKHH3Q7Z736 793 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 ZNF396Q96N95 335 aaPredicted RBP11.02□□□□□ -0.65
NDE1-208ENST00000573694 MAP3K14Q99558 947 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 CPVLQ9H3G5 476 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 NRBP1Q9UHY1 535 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 GABRQQ9UN88 632 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
NDE1-208ENST00000573694 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
NDE1-208ENST00000573694 FRMPD2Q68DX3 1309 aaPredicted RBP11.02□□□□□ -0.65
NDE1-208ENST00000573694 PALM3A6NDB9 673 aaPredicted RBP11.01□□□□□ -0.65
NDE1-208ENST00000573694 WDR46O15213 610 aaKnown RBP11.01□□□□□ -0.65
NDE1-208ENST00000573694 SLC25A27O95847 323 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 TFRCP02786 760 aaKnown RBP11.01□□□□□ -0.65
NDE1-208ENST00000573694 JAG1P78504 1218 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 MTFR1Q15390 333 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 ZSCAN23Q3MJ62 389 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 MORN1Q5T089 497 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 NECAB2Q7Z6G3 386 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 DIS3L2Q8IYB7 885 aaKnown RBP11.01□□□□□ -0.65
NDE1-208ENST00000573694 APBA2Q99767 749 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
NDE1-208ENST00000573694 MROH8Q9H579 483 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 CLIC4Q9Y696 253 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 IVNS1ABPQ9Y6Y0 642 aa11.01□□□□□ -0.65
NDE1-208ENST00000573694 FAM205CA6NFA0 338 aa11□□□□□ -0.65
NDE1-208ENST00000573694 BTBD18B2RXH4 712 aa11□□□□□ -0.65
NDE1-208ENST00000573694 CYTH3O43739 400 aa11□□□□□ -0.65
NDE1-208ENST00000573694 FARP2O94887 1054 aaPredicted RBP11□□□□□ -0.65
NDE1-208ENST00000573694 TTLL1O95922 423 aa11□□□□□ -0.65
NDE1-208ENST00000573694 PARP1P09874 1014 aaKnown RBP11□□□□□ -0.65
NDE1-208ENST00000573694 PDHBP11177 359 aa11□□□□□ -0.65
NDE1-208ENST00000573694 SCG2P13521 617 aa11□□□□□ -0.65
NDE1-208ENST00000573694 LIG1P18858 919 aa11□□□□□ -0.65
NDE1-208ENST00000573694 VCAM1P19320 739 aa11□□□□□ -0.65
NDE1-208ENST00000573694 ATP2B2Q01814 1243 aa11□□□□□ -0.65
NDE1-208ENST00000573694 MAP2K5Q13163 448 aa11□□□□□ -0.65
NDE1-208ENST00000573694 NR5A1Q13285 461 aa11□□□□□ -0.65
NDE1-208ENST00000573694 GNL2Q13823 731 aaKnown RBP11□□□□□ -0.65
NDE1-208ENST00000573694 SEPT2Q15019 361 aa11□□□□□ -0.65
NDE1-208ENST00000573694 NPY5RQ15761 445 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms