RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 FASTKD5Q7L8L6 764 aaKnown RBP15.65■□□□□ 0.1
CCDC40-209ENST00000573474 KCNG4Q8TDN1 519 aa15.65■□□□□ 0.1
CCDC40-209ENST00000573474 BIN2Q9UBW5 565 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-209ENST00000573474 ADAMTS5Q9UNA0 930 aa15.65■□□□□ 0.1
CCDC40-209ENST00000573474 CEP131Q9UPN4 1083 aa15.65■□□□□ 0.1
CCDC40-209ENST00000573474 ABCB11O95342 1321 aa15.65■□□□□ 0.1
CCDC40-209ENST00000573474 MYPNQ86TC9 1320 aa15.65■□□□□ 0.1
CCDC40-209ENST00000573474 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 VWA5AO00534 786 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 SPTLC2O15270 562 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-209ENST00000573474 ATP2B1P20020 1258 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-209ENST00000573474 GJA5P36382 358 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 CLK2P49760 499 aaKnown RBP15.64■□□□□ 0.09
CCDC40-209ENST00000573474 SNAPC2Q13487 334 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 NONOQ15233 471 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC40-209ENST00000573474 JAKMIP3Q5VZ66 844 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 CST9Q5W186 159 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 ATG4CQ96DT6 458 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 CCPG1Q9ULG6 757 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 TCHHQ07283 1943 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 ZNF536O15090 1300 aa15.64■□□□□ 0.09
CCDC40-209ENST00000573474 GOLGA6L4A6NEF3 574 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 BMP15O95972 392 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 MBD3O95983 291 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 PTPAQ15257 358 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 UBE2SQ16763 222 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 TTC38Q5R3I4 469 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 TREML2Q5T2D2 321 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 WNK4Q96J92 1243 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 AGBL1Q96MI9 1066 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.63■□□□□ 0.09
CCDC40-209ENST00000573474 TMEM260Q9NX78 707 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
CCDC40-209ENST00000573474 DDX49Q9Y6V7 483 aaKnown RBP15.63■□□□□ 0.09
CCDC40-209ENST00000573474 PIK3CDO00329 1044 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 PPP6R2O75170 966 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 ME1P48163 572 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 OAZ1P54368 228 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 PABPC4Q13310 644 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC40-209ENST00000573474 AP3B2Q13367 1082 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 MOGSQ13724 837 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 INF2Q27J81 1249 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 CPXCR1Q8N123 301 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 RAVER2Q9HCJ3 691 aaKnown RBP15.62■□□□□ 0.09
CCDC40-209ENST00000573474 AGTPBP1Q9UPW5 1226 aa15.62■□□□□ 0.09
CCDC40-209ENST00000573474 MORC2Q9Y6X9 1032 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-209ENST00000573474 SPDYE16A6NNV3 312 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-209ENST00000573474 MEIS2O14770 477 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 KIF3CO14782 793 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 OPLAHO14841 1288 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 FOSP01100 380 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-209ENST00000573474 CETPP11597 493 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 TAL1P17542 331 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-209ENST00000573474 GTF2A2P52657 109 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 ZNF174Q15697 407 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 USP17L6PQ6QN14 398 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 REPS2Q8NFH8 660 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 GPT2Q8TD30 523 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 TBCKQ8TEA7 893 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 PGBD1Q96JS3 809 aa15.61■□□□□ 0.09
CCDC40-209ENST00000573474 GCOM1H8Y6P7 765 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-209ENST00000573474 ATP2A1O14983 1001 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 POLR2MP0CAP2 368 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 ZBTB48P10074 688 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-209ENST00000573474 ALAS1P13196 640 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 OSBPP22059 807 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 HUNKP57058 714 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 IRX3P78415 501 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-209ENST00000573474 SPRYD7Q5W111 196 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 ADALQ6DHV7 355 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 NEK8Q86SG6 692 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 MCF2L2Q86YR7 1114 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 SAMD3Q8N6K7 520 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 MB21D1Q8N884 522 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 SMC1BQ8NDV3 1235 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 PCDHA7Q9UN72 937 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 PASKQ96RG2 1323 aa15.6■□□□□ 0.09
CCDC40-209ENST00000573474 LOC285556D6RIA3 1793 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 PTPRFP10586 1907 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 SPDYE3A6NKU9 549 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 WNT7AO00755 349 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 CFBP00751 764 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 MARCKSP29966 332 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-209ENST00000573474 MCM7P33993 719 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 ORC2Q13416 577 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-209ENST00000573474 TKFCQ3LXA3 575 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 GPAT2Q6NUI2 795 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 LBX2Q6XYB7 198 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 KRI1Q8N9T8 703 aaKnown RBP15.59■□□□□ 0.09
CCDC40-209ENST00000573474 CLEC4DQ8WXI8 215 aa15.59■□□□□ 0.09
CCDC40-209ENST00000573474 P2RX7Q99572 595 aaKnown RBP15.59■□□□□ 0.09
CCDC40-209ENST00000573474 ASCC2Q9H1I8 757 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-209ENST00000573474 MAP3K20Q9NYL2 800 aaKnown RBP15.59■□□□□ 0.09
CCDC40-209ENST00000573474 A0A1W2PQ27 194 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 A0A1W2PQ64 194 aa15.58■□□□□ 0.08
CCDC40-209ENST00000573474 A0A1W2PQD8 194 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms